Pairwise Alignments

Query, 290 a.a., transcriptional regulator ilvY (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., transcriptional activator of ilvC; autorepressor from Escherichia coli BL21

 Score =  310 bits (793), Expect = 3e-89
 Identities = 154/289 (53%), Positives = 208/289 (71%), Gaps = 3/289 (1%)

Query: 1   MDIRSLKLYLHLCDSLHFAKTAEQMHVSPSTLSRALQRLEEEVNAKLFERDNRSVTLTHA 60
           MD+R LK +LHL +S HF ++A  MHVSPSTLSR +QRLEE++   LF RDNR+VTLT A
Sbjct: 1   MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLGQPLFVRDNRTVTLTEA 60

Query: 61  GREFKLFAEQTLHHWRNLRHSIDLKQDVLRGTLNLYCSVTAAYSHLPQLLERFRQEHPFV 120
           G E ++FA+QTL  ++ LRH+ID +   L G L+++CSVTAAYSHLP +L+RFR EHP V
Sbjct: 61  GEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAAYSHLPPILDRFRAEHPSV 120

Query: 121 EIALTTGDAANALAEIQQNRADIAIAALPDPFPATLHFAKIDDVPLSLIAPTMRCAVQQQ 180
           EI LTTGDAA+A+ ++    AD+AIA  P+  P  + F+ ++++ + LIAP + C V+ Q
Sbjct: 121 EIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSMLENLAVVLIAPALPCPVRNQ 180

Query: 181 ISQTQIDWARVPFIIPDHGPGRRRADNWFKQMGIS-PNIYAQVSGQEAIASMVALGCGVS 239
           +S  + DW+ VPFI+ D GP RRR + WF++  IS P IYA V G EA+ SMVALGCGV+
Sbjct: 181 VSVEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPMIYATVGGHEAMVSMVALGCGVA 240

Query: 240 ISPEVVINNS--PVRDRIQLLPSPVSIAPFELGCCCKVKRLGDPIVNAF 286
           + PEVV+ NS  PVR+R+ +L       PFELG C + KRL +P++ AF
Sbjct: 241 LLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCAQKKRLHEPLIEAF 289