Pairwise Alignments

Query, 876 a.a., GGDEF domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 986 a.a., EAL domain-containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  465 bits (1196), Expect = e-135
 Identities = 291/849 (34%), Positives = 463/849 (54%), Gaps = 23/849 (2%)

Query: 26  LKYLAHKYKRAEVVQNALLELSHIATQVSSLEEFYLGVHHHLKQLISADNFFIATLDVNS 85
           LK    + +R+E +Q AL  +S +A     + +   G+H  +  L+ A+NFFI   D   
Sbjct: 147 LKDSHEQLERSENLQRALFAISDLAGSERDMPDLLRGIHAIVSTLMYAENFFIVLHDAVQ 206

Query: 86  GAISVPFFADEKDAHPSQLYPEQSLSTLLQQGLTGYVFRTGQTLLCDESKVDELVNAEEI 145
             I   +F D+++  P     +  L  + +  LT YV R G+  + +  ++   V    +
Sbjct: 207 DTIRFLYFVDQQEPVPPGGGQDMPLGAI-EHTLTWYVMRDGKARMGNAEELRSQV-VGPV 264

Query: 146 VNLGSPCHLWLGVPIKHEDIVTAVLVVQTYDTNVSYGDIEVELMTFICHHITGVMERLKH 205
             +G   + WLGVP+  +     VLVVQ+Y  ++ + D ++ L+ F+  HI   +ER + 
Sbjct: 265 TLIGPDSYDWLGVPLLRDGQPRGVLVVQSYRRDIGFTDEDLTLLEFVSSHILTALERKQG 324

Query: 206 QEQLEQAIQQRTKELSQAYDKLKQEVYERRRAERLQKSLFEIAELASSGSDNPVFYTQLH 265
           +++LEQ +Q+RT +L++A   L+QE+ ER+RAE LQ +LF++AELA++  D   FY ++H
Sbjct: 325 KDELEQRVQRRTLQLAEANRGLQQEIVERQRAEHLQTALFQLAELATADIDQGTFYRRVH 384

Query: 266 NVIRHLIPANNCYIALLNEESTHLTFPFYVSQIENQHPGARPLQDGLTEYMLKHKRPLLL 325
            V+  L+ A N +I LL+++   LTFP+ V  +    P  R L  GL+EY+++  R L +
Sbjct: 385 AVVGELLNAQNFFIGLLSDDRLKLTFPYSVDAV-LAPPAERVLTRGLSEYVMRLGRALRV 443

Query: 326 DQNDINNLIAAKEIYAKAPTLNHTQTMHQWIGIPLFIHDEVRGALTIYSFSMTQNYQTKD 385
              DI  L    EI   AP    +  M+ W+G+PL + DEV G + + S+     Y   D
Sbjct: 444 SNADIEELEQRGEI---APGRMSSPAMY-WLGVPLIVADEVIGLVAVQSYRADVVYGAAD 499

Query: 386 LELLTFVSQHIGAAIEKKLAAESLRRSYEELEEKVAARTTALAELNKDLEKEIRQRRNME 445
            ELL+FV+  +  ++ ++ +AESLRR+YE+LE++V  RT A       L KEI +R  M+
Sbjct: 500 QELLSFVASQVANSLTRRRSAESLRRAYEQLEQRVEERTLA-------LRKEIGERERMQ 552

Query: 446 AKLVHDAKHDALTGLPNRAMFMERLNHAIKHVRRHSLEQFALLFIDLDRFKLINDTMGHL 505
            +L H   HDALTGLPNR    ER++ A+  +RR      ALL++D+DRFK+IND++GHL
Sbjct: 553 DQLRHQVMHDALTGLPNRGYLRERIDRALDAMRREPQHPCALLYLDVDRFKIINDSLGHL 612

Query: 506 EGDRFLIETATRLRSCIRSNDTLARLGGDEFVILLDTINDMNDARDVAERVIRKISQSYH 565
            GD  L E A RL  C+R  D +ARL GDEF ILL+       A  VA+RV+  +     
Sbjct: 613 AGDEVLKEVARRLAGCVRHPDLVARLSGDEFAILLEQDELPWAATAVAQRVLDALDAPMR 672

Query: 566 FGTIEFHSGASIGITISGNKLDTSESMLRNADTAMYQAKANGKGCYVIFDDSASQQKMQD 625
               E    AS+GI I       ++ +LR+AD A+Y+AK  G+  Y +FD+  +Q  +  
Sbjct: 673 VAGKELPVTASMGIAIGDGNYVAADELLRDADIALYRAKQLGRKRYELFDERLAQNVVDV 732

Query: 626 IAFENDFRQALQADELQLNFLPIVDLQ-TRQTRSLECRLSWEHPQWGSIPQEVLNKLAEQ 684
           +A E + RQAL     +  F PI  L  + +T   E  + W HPQ G +      ++AE 
Sbjct: 733 LALEGELRQALAQGLFEPYFQPICALDGSGRTLGYEALIRWNHPQRGVLRPGDFLRIAED 792

Query: 685 ANLQVELDKYAIRLLDKCYHQLLISHG-DNLDLHLMLSSQHLKHKHVLRGLKTTLKQTQL 743
           + L   +D +   L   C  +LL+ HG D+  + + +S+ HL+H H  R L   L++T L
Sbjct: 793 SGLIETIDWHMFEL--SC--RLLLQHGRDDSFMTVNVSALHLRHAHFDRRLVQLLERTGL 848

Query: 744 PLSQLWLFFNEKALVQETENHISGFELLNKLGVNLGISHYGSGHSPLNSLLFLPLKGLKL 803
           P  +L L   E AL+   E+  +  E L  +G+   +  +G+G+S L+ L  LPL+ LK+
Sbjct: 849 PPQRLVLEVTEGALLDNPEHVRATLERLRAIGIGAALDDFGTGYSSLSYLHSLPLRILKI 908

Query: 804 DANITKQLQDEQHIK---LMSAYQKAASTLELQTFVDGLQSPEQINIFHALGYRFGQGCA 860
           D    ++L  + +     +++A    A  L +Q   +G+++P Q +   A+G   GQG  
Sbjct: 909 DRAFVQELDKDANTSSTTVVAAILALARALGIQVIAEGIETPTQRDALMAMGCEMGQGYL 968

Query: 861 LASPFALVE 869
           L  P  + +
Sbjct: 969 LGRPAPITQ 977



 Score = 99.8 bits (247), Expect = 7e-25
 Identities = 69/246 (28%), Positives = 121/246 (49%), Gaps = 22/246 (8%)

Query: 208 QLEQAIQQRTKELSQAYD--KLKQEVYERRRAERLQKSLFEIAELASSGSDNPVFYTQLH 265
           +LE  ++   + L  A +  +LK    +  R+E LQ++LF I++LA S  D P     +H
Sbjct: 126 ELETPLRLAGQHLRWALEWAELKDSHEQLERSENLQRALFAISDLAGSERDMPDLLRGIH 185

Query: 266 NVIRHLIPANNCYIALLNEESTHLTFPFYVSQIENQHPGA------RPLQDGLTEYMLKH 319
            ++  L+ A N +I L +     + F ++V Q E   PG         ++  LT Y+++ 
Sbjct: 186 AIVSTLMYAENFFIVLHDAVQDTIRFLYFVDQQEPVPPGGGQDMPLGAIEHTLTWYVMRD 245

Query: 320 KRPLLLDQNDINNLIAAKEIYAKAPTLNHTQTMHQWIGIPLFIHDEVRGALTIYSFSMTQ 379
            +  + +  ++ + +         P        + W+G+PL    + RG L + S+    
Sbjct: 246 GKARMGNAEELRSQVV-------GPVTLIGPDSYDWLGVPLLRDGQPRGVLVVQSYRRDI 298

Query: 380 NYQTKDLELLTFVSQHIGAAIEKKLAAESLRRSYEELEEKVAARTTALAELNKDLEKEIR 439
            +  +DL LL FVS HI  A+E+K       +  +ELE++V  RT  LAE N+ L++EI 
Sbjct: 299 GFTDEDLTLLEFVSSHILTALERK-------QGKDELEQRVQRRTLQLAEANRGLQQEIV 351

Query: 440 QRRNME 445
           +R+  E
Sbjct: 352 ERQRAE 357