Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 326 a.a., porin from Pseudomonas simiae WCS417

 Score = 87.0 bits (214), Expect = 3e-22
 Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 1/109 (0%)

Query: 73  RKEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQER 132
           R E++V F  + + + P  Y  ++ +A F+ QYP T V + GHT   G D  N++LSQ R
Sbjct: 214 RVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRR 273

Query: 133 ANAVTAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRVVAEV 181
           A+AV  VL  + G+  SR+TA+GYG SRP+    T      NRRV A V
Sbjct: 274 ADAVKQVLV-KDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASV 321