Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 261 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 1/109 (0%)

Query: 77  NVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAV 136
           +VLF  N + +       I ++A FLR  P  KV +EG+T  TG+D  N+ LS+ RA +V
Sbjct: 143 DVLFATNKSDLKSSGLVNITKLAQFLRDNPDRKVIVEGYTDSTGSDSYNQSLSERRAASV 202

Query: 137 TAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRVVAEVTGDD 185
              LA++ G+D SR+   GYG   P+    +      NRRV   ++ D+
Sbjct: 203 QRALAQQ-GVDISRIVTQGYGKEYPVADNGSVSGRAMNRRVEVTISNDN 250