Pairwise Alignments

Query, 201 a.a., OmpA family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 377 a.a., Outer membrane protein and related peptidoglycan-associated (lipo)proteins from Kangiella aquimarina DSM 16071

 Score =  106 bits (265), Expect = 5e-28
 Identities = 61/144 (42%), Positives = 77/144 (53%), Gaps = 2/144 (1%)

Query: 37  DKDGDGVIEARERCNETAKGAGTDNYGCGQIKSINERK-EINVLFPNNSAYIAPEYYPQI 95
           D D DGV + ++ C  TA G   D  GC ++K   E   ++ + F  N   I PE   +I
Sbjct: 227 DSDNDGVYDYQDACPGTAPGVQVDEKGC-EVKVAEEVVVDMRLNFDTNKYEIKPEMVAEI 285

Query: 96  EEVAIFLRQYPTTKVTIEGHTSRTGTDETNKELSQERANAVTAVLAERFGIDRSRLTAIG 155
            +VA FLRQYP     I+GHT   G+   N+ LS+ RAN+V   L   FGID SRLTA G
Sbjct: 286 AKVAEFLRQYPDVNAEIQGHTDSVGSSAYNQGLSERRANSVKDYLVSNFGIDASRLTAKG 345

Query: 156 YGSSRPIVLEQTPEAEIRNRRVVA 179
           YG  +PI    T E    NRR  A
Sbjct: 346 YGEEQPIADNSTEEGRALNRRAEA 369