Pairwise Alignments

Query, 484 a.a., HlyD family secretion protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 433 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  154 bits (388), Expect = 8e-42
 Identities = 112/433 (25%), Positives = 212/433 (48%), Gaps = 25/433 (5%)

Query: 57  WALAAMVAC-FLLWAGFAELDTVTTGSGKVIPSSQVQVIQSLDGGIMQELFVRDGDLVTK 115
           W L  + A  F LWA  A LD      G V+ S + + +Q+L  G++  + V++G+ V +
Sbjct: 19  WLLTVVGAGGFFLWASLAPLDQGIPVQGTVVVSGKRKAVQTLSPGVVSRILVKEGERVKQ 78

Query: 116 GQPLVRIDDTRFRSDFAQQEQEVFGLKTNAIRMRAELDSILISDMTSDWREQVKITKKDL 175
           GQPL R+D T+ ++D    + +      +  R ++E D+                 +  +
Sbjct: 79  GQPLFRLDQTQHQADVQSLQAQYRMAWASVARWQSERDN-----------------RASI 121

Query: 176 VFPDSI-IQAEPAL---VKRQQEEYSGRLDNLSNQLEILVRQIQQRQQEIDDLASKTTTL 231
           +FP  +    +PAL   ++ Q++ +S R +  + +   +   I     +++ +    + L
Sbjct: 122 LFPPELSANPDPALALVLEGQRQLFSSRREAFAREQAGIRANIDGATAQLNGMRRARSDL 181

Query: 232 TTSMQLISRELELTRPLAKKGIVPEVELLKLERAVNDAQGELNSLRLLRPKLKAALDEAI 291
           T   Q +  +L   +PLA  G +P   L+  +R ++  Q +L        +++  + E+ 
Sbjct: 182 TAQAQSLRDQLSNLQPLADNGYIPRNRLMDYQRQLSQVQQDLAQNTGESGRVEQGILESR 241

Query: 292 LKRREAVFVYAADLRAQLNETQTRLSRMNEAQVGAQDKVSKAIITSPVNGTIKTVHINTL 351
           LK ++    Y  ++R+QL ++Q R   + +    A   +  + I +P +G    + ++T 
Sbjct: 242 LKLQQHSEEYQKEVRSQLADSQLRSLTLEQQLTSAGFDLQHSEINAPADGIAVNLSVHTE 301

Query: 352 GGVVQPGVDIIEIVPSEDQLLIETKILPKDIAFLHTGLPAVVKVTAYDFTRYGGLKGTVE 411
           G VV+ G  ++EIVP + +L +E  +    +  + T LP  +  TA++ +R   + G V 
Sbjct: 302 GAVVRAGETLLEIVPQDTRLEVEGHLPVHLVDKVGTHLPVDILFTAFNQSRTPRVPGEVS 361

Query: 412 HISADTSQDEE-GNSFYLIKVRTEESSLIKDDGTQMPIIPGMLTTVDVITGQRSILEYIL 470
            ISAD   DE+ G  +Y+++    E++L K  G  + I PGM   + V TG+RS+L Y+ 
Sbjct: 362 LISADQMLDEKTGAPYYVLRTTVSEAALEKLHG--LVIKPGMPAEMFVRTGERSLLNYLF 419

Query: 471 NPILRAKDTALRE 483
            P+L    +AL E
Sbjct: 420 KPLLDRAGSALTE 432