Pairwise Alignments

Query, 726 a.a., toxin secretion ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 731 a.a., Cyclolysin secretion/processing ATP-binding protein CyaB from Pseudomonas putida KT2440

 Score =  313 bits (801), Expect = 3e-89
 Identities = 194/687 (28%), Positives = 355/687 (51%), Gaps = 8/687 (1%)

Query: 26  LDCLVLLTEHFGNPCSSDSLAAGLPLSGAVLTPDLLPQAASRAGLAAKLSRKGLNEISPI 85
           L CL+ L  + G   S++ L      +G   +   L +A  + GL AK        +   
Sbjct: 33  LVCLITLARYHGVAVSAEQLQHDHAAAGERFSTGPLLRAFQQLGLKAKHRSVDPARLQQT 92

Query: 86  LLPCILLLKDKKACILREFDLESDRAVIQLPETGGEEILTIESLETLYVGYLFLVKQEYR 145
            LP I +    +  I+    +E ++ ++Q P +   + LT+  L   + G L LV+ + +
Sbjct: 93  PLPAIAVDTRGEYFIIAR--VEGEQVLVQDPHSRAPQALTLAELLVRWSGELILVRSDAQ 150

Query: 146 GDMGFDVYLHDNKTHWLVQTLKDSAPIYRDALIASVLVNIFALVSPLFIMNVYDKVVPNL 205
             +G   +       W +  L     ++ + L+ S+++ I AL++PLF   V DKV+ + 
Sbjct: 151 LPLGLSRF----DFTWFIPALVKYRRLFGEVLVVSLVIQILALLTPLFFQVVMDKVLVHR 206

Query: 206 AFDSLWVLAIGASIAYLFDLVMRQLRSYLIDVAGKKVDIIVSSRLFAKAIGIPLEK-RSP 264
              +L V+A+G  +  LF+ ++  LR+Y+      ++D+ + ++LF   I +P     + 
Sbjct: 207 GLTTLDVIALGLLVVVLFETLLSGLRTYVAAHTASRIDVELGAKLFRHLIDLPTAYFHAR 266

Query: 265 SIGGMAKQLGEFDSIREILTSATITTLVDLPFALFFLIVIYIVAGDLAVIPVVGGMIIIG 324
            +G    ++ E ++IR  LT+ +IT ++D+ F++ F+ V+++ +G L ++ V        
Sbjct: 267 RVGDSVARVRELENIRSFLTNNSITLVLDVLFSVVFIAVMFLYSGWLTLVVVGSLPFYFL 326

Query: 325 FTLYTQPKLKAAIEEGNKFSSLKHGHLIESLSALESIKANGAEGIVQKSWQQMIGHSANW 384
            +L   P L+A I++  +  +     L+E+++ ++++K+   E  V + W   +    + 
Sbjct: 327 VSLVVTPLLRALIDQSFQRGAENQAFLVEAVNGIDTLKSMAVEPQVTRRWNDQLAAYVSA 386

Query: 385 QLKSKKLSNSVSNTANFIVQFTVVCVVILGVYRVSDNLISMGGIIAAVMLSSRAIAPMAQ 444
             K++ LS+  + +   I +   V  + LG   V +  +++G +IA  ML+ R   P+ +
Sbjct: 387 SFKTQNLSSLANESVGLIGKLVTVATLWLGARLVIEGALTVGELIAFNMLAGRVSQPIIR 446

Query: 445 LAGLMTRANHTASALRQLNELMLQEDEFENKGHLVSKQRLIGKINADHVGFSYPGSEKPV 504
           LA L T    T  ++++L +++    E  N+G       L+G+I  D V F Y      V
Sbjct: 447 LAQLWTSFQQTGVSIQRLGDILNTRTEV-NQGKGTVLPTLVGQIELDRVCFRYRPDGGEV 505

Query: 505 LHPLSLTINPGERIAIIGRNGSGKSTLAKLLVGLFQPTTGSLRYDGVDSAQIHPSDLRRN 564
           +  +SL I  GE I ++GR+GSGKSTL +L+  L+ P  G +  DG D A    + LRR 
Sbjct: 506 VRDVSLKIAAGEVIGVVGRSGSGKSTLTRLIQRLYSPERGRVLPDGADLAVADVASLRRQ 565

Query: 565 FGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIRAVQLSGVSQFTHLEAEGLDQQVGEGGM 624
            G + QD  LF  T+R+NI  G       ++I A  L+G  +F     +G +  +GE G 
Sbjct: 566 IGVVLQDNVLFRRTVRENIALGNPAAPLEEVIAAATLAGAHEFILELPDGYETLIGEHGA 625

Query: 625 SLSRGQRQTVALARATLNDPPVLLMDEPTASLDARAEQQFIRSMQNVSKDRTLLLITHKM 684
           SLS GQRQ +A+ARA   +P +L+ DE T++LD  +E+   ++M  +   RT+++I H++
Sbjct: 626 SLSGGQRQRIAIARALFGNPRILIFDEATSALDYESERIIQQNMARICAQRTVIIIAHRL 685

Query: 685 HLLQLVDRIIVLERGHVVADGPKAEVL 711
             ++  DRI+V+ERG ++  G   E+L
Sbjct: 686 SAVRHADRIVVMERGQIIEQGTHDELL 712