Pairwise Alignments

Query, 726 a.a., toxin secretion ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 717 a.a., Type I secretion system ATPase, LssB family LapB from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  384 bits (986), Expect = e-111
 Identities = 210/560 (37%), Positives = 344/560 (61%), Gaps = 8/560 (1%)

Query: 159 THWLVQTLKDSAPIYRDALIASVLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGAS 218
           T W    L+    I+ +A++A+ +++   L S L+ M VYD+VVP   + +LWVL  GA 
Sbjct: 119 TEWFSHALRKHRRIFVEAMLATFIISAVGLTSSLYSMQVYDRVVPTKGYATLWVLTAGAL 178

Query: 219 IAYLFDLVMRQLRSYLIDVAGKKVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDS 278
           +A + + +M+Q+RS+++D A K +D+ +S   F KA+ I ++ R  ++G  A Q+  F+S
Sbjct: 179 MAIVLEFMMKQVRSHMVDRASKAIDMELSGVFFGKAMDIRMDARPATVGTFASQIRHFES 238

Query: 279 IREILTSATITTLVDLPFALFFLIVIYIVAGDLAVIPVVGGMIIIGFT---LYTQPKLKA 335
           +R+ +T++T+  L D PFA+FF+ VI ++AG +A++P+   MI IG     L+ +P ++ 
Sbjct: 239 VRQFMTTSTLFILADAPFAVFFVGVIALIAGPVAIVPMA--MIPIGMLVGFLFLKP-IER 295

Query: 336 AIEEGNKFSSLKHGHLIESLSALESIKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSV 395
                 + S+ K+G LIE++  +ESIKA+  E  + + +Q M    A+ +L+ + L++  
Sbjct: 296 LSGANMRESNRKNGLLIEAIDGIESIKASAGEWKMLERYQAMSTSMADNELQLRALTSRG 355

Query: 396 SNTANFIVQFTVVCVVILGVYRVSDNLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHT 455
           +N A  I Q + V ++  G Y ++   ++MGG+IA  ++S RA+APMAQ+  L+ +  + 
Sbjct: 356 TNMAQVIQQLSYVGLIASGAYAITAGDLTMGGLIACSIISGRALAPMAQIPQLIIQWKNA 415

Query: 456 ASALRQLNELMLQEDEFENKGHLVSKQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPG 515
             AL+ L+ +M    + E    LV  +   G +  D V F Y   ++PVL   +L I PG
Sbjct: 416 QIALKALDAIMAMPSDREASQRLVVPETCEGLLRLDKVAFHY-NPQQPVLTVPALEIRPG 474

Query: 516 ERIAIIGRNGSGKSTLAKLLVGLFQPTTGSLRYDGVDSAQIHPSDLRRNFGYLPQDVTLF 575
           ERIA+IG  GSGK+TL KLL GL+ P  G +  DGVD   + P  +R + GYLPQDV LF
Sbjct: 475 ERIAVIGSVGSGKTTLIKLLSGLYHPREGQIFLDGVDVQHLAPEYVREHIGYLPQDVRLF 534

Query: 576 HGTIRDNILFGTRQVTEHQLIRAVQLSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVA 635
           +GT+R+N+  G    ++  ++ A QL+G+        +GL+ ++ EGG  LS GQRQ V 
Sbjct: 535 NGTLRENLTLGLPTPSDATILAACQLTGLDLVVQTHPKGLELEISEGGRGLSGGQRQLVG 594

Query: 636 LARATLNDPPVLLMDEPTASLDARAEQQFIRSM-QNVSKDRTLLLITHKMHLLQLVDRII 694
           L R  +  P +LL+DEPTAS+DA+ E   +R + + +S D  L+++THK  +L  V+R+I
Sbjct: 595 LTRMLIARPKLLLLDEPTASMDAQLEATVMRHLFEEISPDSALVVVTHKPAVLPRVNRLI 654

Query: 695 VLERGHVVADGPKAEVLEKL 714
           V++RG ++ DGP+  V++KL
Sbjct: 655 VVDRGRILLDGPREAVIDKL 674