Pairwise Alignments

Query, 726 a.a., toxin secretion ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 583 a.a., bacteriocin ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  231 bits (589), Expect = 8e-65
 Identities = 153/538 (28%), Positives = 271/538 (50%), Gaps = 6/538 (1%)

Query: 178 IASVLVNIFALVSPLFIMNVYDKVVPNLAFDSLWVLAIGASIAYLFDLVMRQLRSYLIDV 237
           + S LVNI  L   LF+M VYD+V+P+ +  +L  L   A++ Y F  +   +R  L+  
Sbjct: 29  LMSALVNILYLTGSLFMMEVYDRVLPSRSLPTLVALFAIAAVLYAFQGLFDAIRGRLLVR 88

Query: 238 AGKKVDIIVSSRLFAKAIGIPLEKRSPSIGGMAKQLGEFDSIREILTSATITTLVDLPFA 297
              ++D ++S++++   IG+ L  R P  G  A+ L + D+IR  L+ +  T L DLP+ 
Sbjct: 89  ISDRLDQVLSTKVYDAVIGLQL--RLPVSGRQAQPLRDLDTIRSFLSGSGPTALFDLPWL 146

Query: 298 LFFLIVIYIVAGDLAVIPVVGGMIIIGFTLYTQPKLKAAIEEGNKFSSLKHGHLIESLSA 357
            F++ + +     L V  + G  I+  FTL T+   +  +EE  + +S ++  +  +   
Sbjct: 147 PFYIAICFAFHFWLGVTALAGAAILTVFTLMTELVSRRPVEEAAQHASRRNRLIEATRRN 206

Query: 358 LESIKANGAEGIVQKSWQQMIGHSANWQLKSKKLSNSVSNTANFIVQFTVVCVVILGVYR 417
            + I   G    ++  WQ         Q  +  +++     +  +       ++ +G + 
Sbjct: 207 ADIIAVMGMASPLRDRWQTDNRAYVREQRSASDIASGFGVASKVLRMLLQSGILAVGAWL 266

Query: 418 VSDNLISMGGIIAAVMLSSRAIAPMAQLAGLMTRANHTASALRQLNELMLQEDEFENKGH 477
           V +   + G IIA  +LS+RA+AP+               +  +L + +    +   +  
Sbjct: 267 VINEQATPGIIIAGSILSARALAPVDLAIANWKGFIAARQSRYRLEKTLALLPDAAMRLD 326

Query: 478 LVSKQRLIGKINADHVGFSYPGSEKPVLHPLSLTINPGERIAIIGRNGSGKSTLAKLLVG 537
           L + Q L+   + + V    P + +PVL  ++ T+  G  + +IG +GSGKS+LA+LLVG
Sbjct: 327 LPAPQALL---SVERVNAIPPEATEPVLQDIAFTLAAGSGLGVIGASGSGKSSLARLLVG 383

Query: 538 LFQPTTGSLRYDGVDSAQIHPSDLRRNFGYLPQDVTLFHGTIRDNILFGTRQVTEHQLIR 597
           L++P  G++R DG    Q  P  L R+ GY+PQ + L  GTI +NI    RQ +  ++I 
Sbjct: 384 LWRPVKGAIRLDGATLDQWPPEALARHIGYMPQMIELLDGTIAENIASFDRQASPEKIIA 443

Query: 598 AVQLSGVSQFTHLEAEGLDQQVGEGGMSLSRGQRQTVALARATLNDPPVLLMDEPTASLD 657
           A + + +        +G    VGE G  LS GQ+Q +ALARA   DP ++++DEP ++LD
Sbjct: 444 AARAARIHDLVVSLPDGYSTDVGETGRQLSAGQKQRIALARALYGDPFLVVLDEPNSNLD 503

Query: 658 ARAEQQFIRSMQNV-SKDRTLLLITHKMHLLQLVDRIIVLERGHVVADGPKAEVLEKL 714
           +  E     ++  +  +    ++I H+   L  +D++++L  G   A G K EVL K+
Sbjct: 504 SEGEDALTAAILGIRERGGVAIVIAHRPSALLAMDKVLMLADGRQQAFGAKEEVLAKV 561