Pairwise Alignments

Query, 310 a.a., porphobilinogen deaminase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 321 a.a., hydroxymethylbilane synthase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  213 bits (542), Expect = 5e-60
 Identities = 130/311 (41%), Positives = 182/311 (58%), Gaps = 12/311 (3%)

Query: 6   IRIATRKSPLAMWQAEFVKAELER---IHPGIV---VELLPMSTKGDVILDTPLAKVGGK 59
           +RI TR+S LA+ Q+  ++  + R   +  G +   V L+ + T GD I D  L +VGGK
Sbjct: 5   LRIGTRRSKLALAQSGMMQRAIGRALNVPEGEIETAVPLVEIVTTGDRIQDRRLLEVGGK 64

Query: 60  GLFVKELEVAMLEDQADIAVHSMKDVPVDFPEGLGLEVICEREDPRDAFVSNIYKSISEL 119
            LF KE+E A+L  + DIA+HSMKDVP + PEGL +  I ERED RDAFVS  + S   L
Sbjct: 65  ALFTKEIEEALLAGRIDIAIHSMKDVPAEQPEGLCIAAIPEREDARDAFVSRDFDSFDTL 124

Query: 120 PLGATVGTSSLRRQCQLRASRPDLIIKDLRGNVGTRLAKLDNGEYDAIILAAAGLIRLKL 179
           P GA +GT+SLRRQ Q  A RPDL ++ LRGN+ TRL +   G++DAI+LA +G+ RL +
Sbjct: 125 PFGARLGTASLRRQAQALALRPDLKVEMLRGNIDTRLRRAAEGDFDAILLAVSGMTRLGV 184

Query: 180 SERIASFISAEESLPANGQGAVGIECRTNDERV---KALLAPLEHLETRYRVIAERAMNT 236
           ++ I   +S +  LPA GQGA+ I+ R  D         +A L H ET   + AER   T
Sbjct: 185 TDHIREKLSLDAFLPAPGQGALAIQTRAADIDAPLNAQWVAALNHPETALCIAAERGAMT 244

Query: 237 RLEGGCQVPIGAFAEIDGDEMTLRGLVGNPDGS---EIIEGVITGPKTEATQLGVALAEE 293
            LEG C+  +GA+A ID D + L   + +PDGS     +  +    + +A  LG  L  E
Sbjct: 245 ALEGSCRTAVGAYARIDNDTLHLTTEMLSPDGSARWRRVGDLFQPTEADARTLGQRLGGE 304

Query: 294 LLSKGAKSILD 304
           + +      +D
Sbjct: 305 VHASAGDQEVD 315