Pairwise Alignments

Query, 206 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 235 a.a., hypothetical protein (NCBI) from Escherichia coli BW25113

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 59/220 (26%), Positives = 96/220 (43%), Gaps = 28/220 (12%)

Query: 9   DELIIREYLLDNPDFFNRYPELLLAMRLPHLERGAISLVERRQELLRQRVNQLEEEITSL 68
           D+  + +YL+ NP+FF R    + A+R+PH  RG +SLVE      R  ++ LEE +  L
Sbjct: 16  DDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALL 75

Query: 69  LTMAARNEKIFLFNTELSFKLLNCVNLESL-----------------KEVLAD--NLKAQ 109
           +  A  NE +F     L   L    +L+ +                   +  D   L A 
Sbjct: 76  MEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAP 135

Query: 110 FNFTHVRLISVLEADVEMKAIWAERL-RKEYYFGRLTQQEAKRLF--GSEVGSVALVKLA 166
            N TH+ L     +    + +  +RL ++++Y G L   E   +      VGSVA+  L 
Sbjct: 136 SNHTHLAL-----SRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKAVGSVAMSMLG 190

Query: 167 DDIPV-IFAVASHDATHFHPDMDNMLLEQIRRLLAHMLAK 205
            D  + +    S DA+H+       LL +I  +L  +L +
Sbjct: 191 SDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLER 230