Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., tyrosine recombinase XerC from Pectobacterium carotovorum WPP14

 Score =  273 bits (697), Expect = 5e-78
 Identities = 137/286 (47%), Positives = 195/286 (68%), Gaps = 2/286 (0%)

Query: 12  FEAYMQSERQLSAHTVRNYLYELQRGRELLPEG--IDLLNVGREHWQQVLAKLHRKGLSP 69
           F  Y++ ERQLS  T  +YL +L     +L      D   +     + V+++  R GL  
Sbjct: 23  FLRYLKVERQLSPLTQTSYLRQLSAVITILSAAGVADWRRLDASGVRSVVSRSKRDGLHS 82

Query: 70  RSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTHLLEIDGNDP 129
            SL+L LSA++ + ++++  G +  NPAKG+S P+  +PLPKN+DVD    LLEI+ +DP
Sbjct: 83  SSLALRLSALRSFLDWMVSRGVLVANPAKGVSTPRAGRPLPKNMDVDETNRLLEINLDDP 142

Query: 130 LTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERIVPVGRYAIDAIS 189
           L +RD+ ++E+ Y +GLRLAEL  +D   +     E+ V+GKG+KER +P+G+ A+  + 
Sbjct: 143 LAVRDRTMLEVMYGAGLRLAELVGMDYQHIDLASGEIWVMGKGSKERKLPIGKTAVTWLE 202

Query: 190 AWLECRRQIPCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHKLRHSFATHM 249
            WL  R     +D+A+F++ +G+R+S R++Q R ++WG +Q ++  VHPHKLRHSFATHM
Sbjct: 203 RWLALRELFGPQDDAVFISNQGRRISMRNVQKRFAEWGIKQGINSHVHPHKLRHSFATHM 262

Query: 250 LESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKK 295
           LESS DLRAVQELLGH NL+TTQIYT LDFQHLA VYD AHPRAK+
Sbjct: 263 LESSGDLRAVQELLGHANLTTTQIYTHLDFQHLASVYDAAHPRAKR 308