Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 303 a.a., tyrosine recombinase XerC from Serratia liquefaciens MT49

 Score =  270 bits (690), Expect = 3e-77
 Identities = 143/292 (48%), Positives = 193/292 (66%), Gaps = 14/292 (4%)

Query: 12  FEAYMQSERQLSAHTVRNYLYELQRGRELLPEGIDLLNVGREHW--------QQVLAKLH 63
           F  Y++ ERQLS  T  +Y  +LQ    L  +      +G   W        + + A+  
Sbjct: 15  FLRYLKVERQLSPLTQLSYSRQLQALMALAQD------MGITEWPALDAAKVRMLAARSK 68

Query: 64  RKGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTHLLE 123
           R GL   SL+L LSA++ + ++ +  G +  NPAKG+  P+  + LPKNIDVD +  LL+
Sbjct: 69  RAGLQSSSLALRLSALRSFLDWQVSQGMLIANPAKGIRTPRSGRHLPKNIDVDEMNQLLD 128

Query: 124 IDGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERIVPVGRY 183
           ID NDPL +RD+A++E+ Y +GLRL+EL  LD   V     E+ VLGKG+KER +PVGR 
Sbjct: 129 IDLNDPLAVRDRAMLEVMYGAGLRLSELVGLDCRHVDLAAGEIWVLGKGSKERKLPVGRT 188

Query: 184 AIDAISAWLECRRQIPCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHKLRH 243
           A+  +  WL  R      D+A+F++ +GKR+S R++Q R ++WG +Q ++  +HPHKLRH
Sbjct: 189 AVTWLEHWLAMRDLFGPSDDAMFLSNQGKRISTRNVQKRFAEWGVKQGVNSHIHPHKLRH 248

Query: 244 SFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKK 295
           SFATHMLESS DLRAVQELLGH NL+TTQIYT LDFQHLA VYD AHPRAK+
Sbjct: 249 SFATHMLESSGDLRAVQELLGHANLTTTQIYTHLDFQHLANVYDAAHPRAKR 300