Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 299 a.a., tyrosine recombinase XerC subunit from Kangiella aquimarina DSM 16071

 Score =  283 bits (724), Expect = 3e-81
 Identities = 151/303 (49%), Positives = 212/303 (69%), Gaps = 17/303 (5%)

Query: 7   SYLQQFEAYMQSERQLSAHTVRNYLYELQRGRELLPEGIDLLNVGREHWQQV-------- 58
           S +Q++   +  E++ S HTV NY  +L++            N G  +WQQ+        
Sbjct: 3   SDIQRYLNRLLHEKRYSEHTVNNYRRQLEKLLAFCQ------NAGYNNWQQITTQDIRML 56

Query: 59  LAKLHRKGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSL 118
           +AK HR+G SP + +L LSA +++ EFLL    I+LN A G+  PK+AK LPKNIDVDSL
Sbjct: 57  IAKQHRQGASPATCALLLSASRRFLEFLLSEKKIKLNSAVGVRGPKKAKRLPKNIDVDSL 116

Query: 119 THLLE-IDGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERI 177
            H L+ +  ++ L +RDKA+MEL YSSG+RLAEL+ +D++ + +  + +RVLGKGNK R 
Sbjct: 117 NHFLDQMPEDESLQIRDKAMMELLYSSGIRLAELSGMDVNDLSFSDQILRVLGKGNKIRE 176

Query: 178 VPVGRYAIDAISAWLECRRQI--PCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMR 235
           VP G  A   ++ W++ R Q+    ++ ALFV+++G RL++R+IQ R+S WG++  L+ R
Sbjct: 177 VPFGNSAKKILTIWIKERNQLVKSADEKALFVSQQGNRLTNRAIQQRLSHWGKQLGLNDR 236

Query: 236 VHPHKLRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKK 295
           +HPHKLRHS ATH+LESS+DLRAVQELLGH ++STTQIYT LDFQHLAK YD AHPRA+K
Sbjct: 237 LHPHKLRHSCATHVLESSSDLRAVQELLGHASISTTQIYTHLDFQHLAKTYDAAHPRARK 296

Query: 296 QQD 298
           ++D
Sbjct: 297 KKD 299