Pairwise Alignments

Query, 299 a.a., integrase/recombinase XerC (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 302 a.a., tyrosine recombinase XerC from Dickeya dadantii 3937

 Score =  277 bits (709), Expect = 2e-79
 Identities = 148/295 (50%), Positives = 202/295 (68%), Gaps = 16/295 (5%)

Query: 10  QQFEAYMQSERQLSAHTVRNYLYELQRGRELLPEGIDLLNV-GREHWQQ--------VLA 60
           + F  Y++ ERQLS  T  +Y ++LQ         ID+L+  G   WQ         V+A
Sbjct: 12  EAFLRYLRVERQLSPLTQSSYAHQLQ-------VIIDMLSASGIADWQALDAAGVRAVVA 64

Query: 61  KLHRKGLSPRSLSLWLSAVKQWGEFLLRAGAIELNPAKGLSAPKQAKPLPKNIDVDSLTH 120
           +  R GL+  SL+  LSA++ + ++L+  G ++ NPA+G+ APK  + LPKN+DVD ++ 
Sbjct: 65  RGKRDGLNAASLAQRLSALRSFLDWLVGRGELKANPARGVPAPKAGRHLPKNMDVDEMSR 124

Query: 121 LLEIDGNDPLTLRDKAIMELFYSSGLRLAELAALDLSSVQYDQREVRVLGKGNKERIVPV 180
           LL+ID +DPL +RD+A++E+ Y +GLRLAEL  LD   V  D  EV V+GKG+KER +P+
Sbjct: 125 LLDIDLSDPLAVRDRAMLEVMYGAGLRLAELVGLDCGHVDLDSGEVWVMGKGSKERKLPI 184

Query: 181 GRYAIDAISAWLECRRQIPCEDNALFVTEKGKRLSHRSIQARMSKWGQEQALSMRVHPHK 240
           G  A+  +  WL  R     ED+A+F++  GKR+S R++Q R ++WG +Q ++  VHPHK
Sbjct: 185 GATAVTWLRNWLAIRDIYAPEDDAIFISSLGKRISMRNVQKRFAEWGVKQGVNSHVHPHK 244

Query: 241 LRHSFATHMLESSADLRAVQELLGHENLSTTQIYTSLDFQHLAKVYDNAHPRAKK 295
           LRHSFATHMLESS DLRAVQELLGH NLSTTQIYT LDFQHLA VYD AHPRA++
Sbjct: 245 LRHSFATHMLESSGDLRAVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRARR 299