Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 398 a.a., NupC/NupG family nucleoside CNT transporter from Pectobacterium carotovorum WPP14

 Score =  181 bits (460), Expect = 3e-50
 Identities = 119/401 (29%), Positives = 212/401 (52%), Gaps = 12/401 (2%)

Query: 3   QSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNTVG 62
           Q IL + V+  + LL   +R  I  R +I    I I LA+F L ++IG   +  V+    
Sbjct: 8   QFILALVVVAALALLVCRDRKSIRIRFIIQLLVIEILLAYFFLYSDIGLGAVKGVAALFD 67

Query: 63  KVFGYGTEGIKFAFGSLVNFSVEGIGFVWALQVLPQIIFTAALTSLLYYLGIMQWFVLII 122
           K+ G+  +G  F FG +VN     I F +  +VL  I+F +AL  +L ++ ++   +  I
Sbjct: 68  KLLGFAGQGTDFVFGDMVNSEKNLISFFF--KVLCPIVFISALIGILQHIKVLPIIIRAI 125

Query: 123 GGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLSSIAGSI 182
           G  L KV G  + ES NA  ++ILGQ+E  +  K     ++  +++ +    +S+++ SI
Sbjct: 126 GTVLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSEKRMYTMSATAMSTVSMSI 185

Query: 183 LAGLAGMGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPDDEKPSSFIDAIA 242
           +     M +   +++ A  ++  +  +   L+ P       E+ +L +  +  SF + + 
Sbjct: 186 VGAYMSM-LDAKFVVAALILNMFSTFIVLSLINPYKVGEEQEL-QLGNLHENQSFFEMLG 243

Query: 243 KGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMILGTLFAPVAWLI 302
           +  +AG  +A IV A++I  I L+A +N    AI   FG   ++   +LG +F P AW++
Sbjct: 244 EYILAGFKVAVIVAAMLIGFIALIAAVNAIFSAI---FG---ISFQEVLGYVFYPFAWIM 297

Query: 303 GIPWVEASTAGAFLGQKIAMNEFVAFANMGNV--ELSARSNAIMTIALCGFANIGSVAMV 360
           GIP  EA   G+ +  K+  NEFVA   +  V  ELS RS  I+++ L  FAN  S+ ++
Sbjct: 298 GIPSHEALQVGSIMATKLVSNEFVAMLELQKVAGELSPRSVGILSVFLVSFANFSSIGII 357

Query: 361 CGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIVSLFI 401
            GA+  +  Q+  ++ + G+K++  +TL ++++AAI  L +
Sbjct: 358 AGAIKGLNEQQGNVVSRFGLKLVYGSTLVSILSAAIAGLVL 398