Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 400 a.a., Nucleoside permease NupC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  183 bits (465), Expect = 7e-51
 Identities = 114/403 (28%), Positives = 218/403 (54%), Gaps = 8/403 (1%)

Query: 1   MIQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNT 60
           ++  +L + V+  + LL S +R  I  R VI    I + LA+F L +++G   +   S  
Sbjct: 4   VLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGFSEM 63

Query: 61  VGKVFGYGTEGIKFAFGSLVNFSVEGIGFVWALQVLPQIIFTAALTSLLYYLGIMQWFVL 120
             K+ G+  EG  F FGS+ +   +G+ F + L+VL  I+F +AL  +L ++ ++   + 
Sbjct: 64  FEKLLGFANEGTNFVFGSMND---QGLAFFF-LKVLCPIVFISALIGILQHIRVLPVVIR 119

Query: 121 IIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLSSIAG 180
            IG  L KV G  + ES NA  ++ILGQ+E  +  K     ++R +++ +    +S+++ 
Sbjct: 120 AIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSRNRMYTMAATAMSTVSM 179

Query: 181 SILAGLAGMGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPDDEKPSSFIDA 240
           SI+     M +   Y++ A  ++  +  +   L+ P       E  ++ +  +  SF + 
Sbjct: 180 SIVGAYMTM-LDPKYVVAALVLNMFSTFIVLSLINPYVVDASEENIQMSNLHEGQSFFEM 238

Query: 241 IAKGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMILGTLFAPVAW 300
           + +  +AG  +A IV A++I  I L+A LN     +   FG  +++   ILG +F PVAW
Sbjct: 239 LGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGY-SISFQGILGYIFYPVAW 297

Query: 301 LIGIPWVEASTAGAFLGQKIAMNEFVAFANMGNV--ELSARSNAIMTIALCGFANIGSVA 358
           ++G+P  EA   G+ +  K+  NEFVA  ++  +   LS R+  I+++ L  FAN  S+ 
Sbjct: 298 VMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIG 357

Query: 359 MVCGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIVSLFI 401
           ++ GA+  +  ++  ++ + G+K++  +TL ++++A+I +L +
Sbjct: 358 IIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL 400