Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., predicted nucleoside transporter (NCBI) from Escherichia coli BW25113

 Score =  308 bits (789), Expect = 2e-88
 Identities = 173/411 (42%), Positives = 249/411 (60%), Gaps = 10/411 (2%)

Query: 1   MIQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNT 60
           +++S+LG+ VLL +  L S N+  IS R V  A  + + +   +L    G  V   V+  
Sbjct: 3   VMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGGIMLWLPPGRWVAEKVAFG 62

Query: 61  VGKVFGYGTEGIKFAFGSLVNFSVE----GIGFVWALQVLPQIIFTAALTSLLYYLGIMQ 116
           V KV  Y   G  F FGSLV   ++    G GF++  +VLP IIF  AL S+LYY+G+M 
Sbjct: 63  VHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVLPAIIFVTALVSILYYIGVMG 122

Query: 117 WFVLIIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLS 176
             + I+GG  QK L  S+ ES  A   I LGQ E P ++KP+   L R ++F  +  G++
Sbjct: 123 ILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAIVKPFIDRLNRNELFTAICSGMA 182

Query: 177 SIAGSILAGLAGMGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPDDE-KPS 235
           SIAGS + G A +GV + YL+ A  M+ P G++FA+LL P TE +      L   E  P 
Sbjct: 183 SIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFARLLSPATESSQVSFNNLSFTETPPK 242

Query: 236 SFIDAIAKGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMILGTLF 295
           S I+A A GA+ G+ IAA V  V++A + ++AL+NG +G +G  FG    +++ ILG L 
Sbjct: 243 SIIEAAATGAMTGLKIAAGVATVVMAFVAIIALINGIIGGVGGWFGFEHASLESILGYLL 302

Query: 296 APVAWLIGIPWVEASTAGAFLGQKIAMNEFVAFANMGNV-----ELSARSNAIMTIALCG 350
           AP+AW++G+ W +A+ AG+ +GQK+A+NEFVA+ N          L A++ AI++ ALCG
Sbjct: 303 APLAWVMGVDWSDANLAGSLIGQKLAINEFVAYLNFSPYLQTAGTLDAKTVAIISFALCG 362

Query: 351 FANIGSVAMVCGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIVSLFI 401
           FAN GS+ +V GA S + P RA  I QLG++ L AATL+NLM+A I   FI
Sbjct: 363 FANFGSIGVVVGAFSAVAPHRAPEIAQLGLRALAAATLSNLMSATIAGFFI 413