Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 428 a.a., Nucleoside permease from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  262 bits (669), Expect = 2e-74
 Identities = 155/427 (36%), Positives = 249/427 (58%), Gaps = 34/427 (7%)

Query: 2   IQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIG--ADVLLAVSN 59
           ++ ++GI  LLGV  LFS +R  + W+ V    G+I+ + F  L T++     V  ++S 
Sbjct: 4   LRGMIGIVALLGVAFLFSASRKSVDWKLV--GIGVILQIVFGFLITKVAFVESVFASISG 61

Query: 60  TVGKVFGYGTEGIKFAFGSLVNFSVEGIGFVWALQVLPQIIFTAALTSLLYYLGIMQWFV 119
              K+  +   G  F FG L   + +  G ++A QVLP IIF + +++ LYYLG++Q  V
Sbjct: 62  AFVKLLSFAQAGAIFLFGDL---ATDSFGTIFAFQVLPTIIFFSTVSAGLYYLGVLQKIV 118

Query: 120 LIIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLSSIA 179
             I   + + +  S AES++AAGNI LGQTEAPLL++P+   +TR+++  +M GG+++IA
Sbjct: 119 FGIAWVMARTMKLSGAESLSAAGNIFLGQTEAPLLVRPFIPTMTRSELMCLMTGGMATIA 178

Query: 180 GSILAGL---------AGMGVALNYLIMACFMSAPAGLMFAKLLIPET-EPTVNEVPELP 229
           G +LA           A      +YL+ A  M+APA ++ +KL+IPET +  +N+  E+ 
Sbjct: 179 GGVLAAYVAFLGGDDPAEQSKFASYLLGASIMNAPAAIVMSKLIIPETNKEGLNDKLEVS 238

Query: 230 DDEKPSSFIDAIAKGAIAGMGIAAIVGAVIIACIGLMALLNGGL-GAIGELFGMPTLTVD 288
            +    + IDA++ GA  G+ +A  VG +++A I ++A+LN  L G +G++ G+    VD
Sbjct: 239 SEGMGVNLIDAMSIGAADGLKLALNVGGMLLAFIAVIAMLNYLLSGVLGDVTGLNQFVVD 298

Query: 289 ------------MILGTLFAPVAWLIGIPWVEASTAGAFLGQKIAMNEFVAFANMGNV-- 334
                        ILG +F   AWL+G+ W +    G+ LGQK  +NEFVA++++ ++  
Sbjct: 299 TTNGRFDGFSLEYILGQVFRIFAWLMGVEWQDTLQVGSLLGQKTVINEFVAYSDLSSMKA 358

Query: 335 --ELSARSNAIMTIALCGFANIGSVAMVCGALSKMIPQRAGLIGQLGMKVLLAATLANLM 392
             +LS +S  I T ALCGF+N  S+A+  G +  + P + G + +LGM  LLAATLA +M
Sbjct: 359 EGDLSPKSIIIATYALCGFSNFSSIAIQVGGIGSIAPGQQGNLSKLGMHALLAATLACMM 418

Query: 393 NAAIVSL 399
            A I  +
Sbjct: 419 TATIAGM 425