Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 424 a.a., nucleoside transporter C-terminal domain-containing protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  262 bits (670), Expect = 1e-74
 Identities = 161/410 (39%), Positives = 236/410 (57%), Gaps = 16/410 (3%)

Query: 2   IQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNTV 61
           +QS+LG+ V++ V    S+NR    WR  IGA  +   L   + A      VL AV+  V
Sbjct: 7   LQSLLGLVVIVAVCWAISENRKAFPWRLTIGAILVQAGLVLALFAIPGSQAVLAAVTGAV 66

Query: 62  GKVFGYGTEGIKFAFGSLVN------FSVEGIGFVWALQVLPQIIFTAALTSLLYYLGIM 115
             +    TEG KF FG L         S +G  F +A QVLP I+  +AL++LL++  I+
Sbjct: 67  DGLAVATTEGTKFVFGYLAGGDQPYAVSNQGALFTFAFQVLPLILVISALSALLWHWKIL 126

Query: 116 QWFVLIIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGL 175
           +W  L  G   QK +G   A ++  A NI LG  E+P++I+ Y   LTR++IF +MV GL
Sbjct: 127 KWITLGFGFLFQKTMGLGGASALAVAANIFLGMIESPIVIRAYLDKLTRSEIFLMMVVGL 186

Query: 176 SSIAGSILAGLAG-----MGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPD 230
           +++AGS +   A      +  A  ++++A  +SAPAG++ A+++IPE E     V +   
Sbjct: 187 ATVAGSTMVAYATILSPVLPNAAGHVLVASIVSAPAGVLLARIIIPEKEGMGGAVADYDS 246

Query: 231 DEKPSSFIDAIAKGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMI 290
             K  S IDAI KG   G+ +   + AV+I  + L+AL+N  LG    +F  P LTV+ +
Sbjct: 247 ALKYDSAIDAIVKGTSDGLMVVLNISAVLIVFVALVALVNVMLGGF-VVFDAP-LTVERM 304

Query: 291 LGTLFAPVAWLIGIPWVEASTAGAFLGQKIAMNEFVAFANMGNV---ELSARSNAIMTIA 347
           LG +FAPVAWLIG+ W +A  AG  LG K+ + EFVAF ++G V   E++ R+  +MT A
Sbjct: 305 LGWIFAPVAWLIGVEWKDADVAGWLLGVKLTLTEFVAFIDLGKVPAAEMTERTRMLMTYA 364

Query: 348 LCGFANIGSVAMVCGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIV 397
           LCGFANIGSV +    LS ++P+R   +  +  K L A  LA LM A++V
Sbjct: 365 LCGFANIGSVGITVTGLSVLMPERREEVLGMVWKGLFAGFLATLMTASVV 414