Pairwise Alignments

Query, 401 a.a., NupC family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 416 a.a., putative nucleoside transporter from Escherichia coli BL21

 Score =  309 bits (791), Expect = 1e-88
 Identities = 171/411 (41%), Positives = 252/411 (61%), Gaps = 10/411 (2%)

Query: 1   MIQSILGIFVLLGVGLLFSDNRSLISWRAVIGAFGIIIALAFFVLATEIGADVLLAVSNT 60
           +++S++G+ VLL +  L S N+  IS R V  A  + IA+   +L    G   +   +  
Sbjct: 3   IMRSVVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALG 62

Query: 61  VGKVFGYGTEGIKFAFGSLVNFSVE----GIGFVWALQVLPQIIFTAALTSLLYYLGIMQ 116
           V KV  Y   G  F FGSLV   ++    G GF++A +VLP IIF  AL SLLYY+G+M 
Sbjct: 63  VHKVMSYSDAGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMG 122

Query: 117 WFVLIIGGSLQKVLGTSRAESMNAAGNIILGQTEAPLLIKPYHRVLTRAQIFAVMVGGLS 176
             + I+G   QK L  S+ ES  A   I L Q E P ++KP+   + R ++F  +  G++
Sbjct: 123 LLIRILGSIFQKALNISKIESFVAVTTIFLRQNEIPAIVKPFIDRMNRNELFTAICSGMA 182

Query: 177 SIAGSILAGLAGMGVALNYLIMACFMSAPAGLMFAKLLIPETEPTVNEVPELPDDE-KPS 235
           SIAGS++ G AGMGV ++YL+ A  M+ P G++FA++L P TEP+      L   E  P 
Sbjct: 183 SIAGSMMIGYAGMGVPIDYLLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPK 242

Query: 236 SFIDAIAKGAIAGMGIAAIVGAVIIACIGLMALLNGGLGAIGELFGMPTLTVDMILGTLF 295
           SFI+A A GA+ G+ IAA V  V++A + ++AL+NG +G IG  FG    +++ I G + 
Sbjct: 243 SFIEAAASGAMTGLKIAAGVATVVMAFVAIIALINGIIGGIGGWFGFANASLESIFGYVL 302

Query: 296 APVAWLIGIPWVEASTAGAFLGQKIAMNEFVAFANMG-----NVELSARSNAIMTIALCG 350
           AP+AW++G+ W +A+ AG+ +GQK+A+NEFVA+ +          L  ++ AI++ ALCG
Sbjct: 303 APLAWIMGVDWSDANLAGSLIGQKLAINEFVAYLSFSPYLQTGGTLEVKTIAIISFALCG 362

Query: 351 FANIGSVAMVCGALSKMIPQRAGLIGQLGMKVLLAATLANLMNAAIVSLFI 401
           FAN GS+ +V GA S + P+RA  I QLG++ L AATL+NLM+A I   FI
Sbjct: 363 FANFGSIGVVVGAFSAISPKRAPEIAQLGLRALAAATLSNLMSATIAGFFI 413