Pairwise Alignments

Query, 244 a.a., chemotaxis motA protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 289 a.a., flagellar motor stator protein MotA from Paraburkholderia sabiae LMG 24235

 Score = 63.5 bits (153), Expect = 4e-15
 Identities = 67/250 (26%), Positives = 106/250 (42%), Gaps = 28/250 (11%)

Query: 4   IGVIVALVFILVGNLIEGGHPSALLDLPAFMIVIGGTIGATVAQFPFSVIIASMKR---- 59
           IG ++ +  ++   +  GGH  AL+     + + G  IGA V   P SV+  ++K     
Sbjct: 5   IGWLLVIGSVIGSFIGVGGHLPALVQPFELLCIFGAAIGAFVVSNPVSVLKKTIKALPAC 64

Query: 60  FKWLIFPLRTDLNERAEFLIEIAGDVRKGGLLSIEDKIDQIDDPFL-HKGLELLVDGYEK 118
           FK   +     L E    L E+    RK G++++E  ++  ++  L  K   +L D +  
Sbjct: 65  FKGGAYSKEIYL-ELIALLYELLQKARKEGMMALEADVNAPEESALFQKYSHVLKDHHLL 123

Query: 119 DNIVEILEK---------------EIEFEQHGIEQTV--KVYEAMGGYCPTMGIVGAVFG 161
           D IV+ L                 + E E H  E +V     + M    P  GIV AV G
Sbjct: 124 DFIVDYLRMMSTGNVNVLEMQDLMDEELETHHAESSVPANAIQKMADGLPAFGIVAAVMG 183

Query: 162 LIHAMGLLDAPDK-LGGAIAVAFIATIYGVAAANIIFLPFGN----RYKAFAHQLSLFKE 216
           ++H MG + AP   LG  IA A + T  G+  A     P  +    + +A A      K 
Sbjct: 184 VVHTMGSVGAPPAVLGEMIAGALVGTFLGILLAYGFIGPVADLLNAKGRAEAKPYQCVKA 243

Query: 217 MTLTGITGIA 226
           + L  ++G A
Sbjct: 244 VLLASLSGYA 253