Pairwise Alignments

Query, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 287 a.a., YicC family protein from Pseudomonas fluorescens SBW25

 Score =  268 bits (686), Expect = 8e-77
 Identities = 140/291 (48%), Positives = 195/291 (67%), Gaps = 8/291 (2%)

Query: 1   MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSRG 60
           M+ SMTA+AR+E     GT SWE+RSVN RYLE +LRLPE FR  E  +R+ LR  +SRG
Sbjct: 1   MVHSMTAFARVEKAGVQGTLSWELRSVNSRYLEPHLRLPESFRDLEGAVREGLRQGISRG 60

Query: 61  KVEVNLRYELADNSNNELKLNQGLAKQLLDAASWL----KQEAGQGEVNLTDILRWPGVL 116
           K+E  LR+   + +   L++++  A QL+ AA  +    KQ A    +N  ++L WPGVL
Sbjct: 61  KLECTLRFT-EETTGKPLQVDRDRAAQLVAAAETIAGLIKQPAA---LNPLEVLAWPGVL 116

Query: 117 SSAEQDMDAIGADLMTAFDLAIDQFIEARGREGAAIKDMLLSRLDGVSEQIAIVREHMPK 176
            +   D  A+ A+ +  F+  + +    R REGA +  ++  RL  + E +  +RE +P+
Sbjct: 117 VADATDPQALNAEALALFNQGLKELKAGREREGAELARLINERLTSIEEDVVTLRELVPQ 176

Query: 177 VMEYQRDKLTNRLAEIKGELDPARIEQEMILLAQKQDVAEEMDRLEAHVNEARRILKKGG 236
           ++  QR K+ +R A++K +LDP R+EQEM+LLAQK DVAEE+DRL  H+ E RR+LK GG
Sbjct: 177 MLATQRQKVLDRFADMKADLDPTRLEQEMVLLAQKSDVAEELDRLSTHILEVRRVLKSGG 236

Query: 237 SEGRRLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQNVE 287
           + GRRLDF+MQE NRE+NTL SK+     T AAV+LKVLIEQMREQ+QN+E
Sbjct: 237 AAGRRLDFLMQELNREANTLGSKAFDPRSTTAAVNLKVLIEQMREQVQNIE 287