Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., Protein RarD from Pseudomonas sp. DMC3

 Score =  263 bits (671), Expect = 5e-75
 Identities = 132/289 (45%), Positives = 192/289 (66%), Gaps = 2/289 (0%)

Query: 7   RKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFGKLRQL 66
           R+G +L +SAY +WG  P+YFK +  V A EI++HRV+WS +F  +++M     G LR+L
Sbjct: 7   RRGYILGLSAYIIWGLFPIYFKAIAEVPAVEIIIHRVLWSALFGALLLMVWKHPGWLREL 66

Query: 67  FKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGERLR 126
              PK+L +L ++  LIA NWL ++W+VNN  ML+ASLGY+INPL+NVLLGM+ LGERLR
Sbjct: 67  LDNPKRLAILALSGTLIAANWLTYVWSVNNGRMLEASLGYYINPLVNVLLGMVILGERLR 126

Query: 127 KLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVETAIL 186
           ++QW AV LA+ GV  Q+   GS+P VSLALA TFG Y L+RK+  V A  GL+VET +L
Sbjct: 127 RMQWVAVGLAAIGVAQQVWQVGSLPWVSLALALTFGFYGLIRKQAPVKALPGLVVETWML 186

Query: 187 LPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSMLGFFQ 246
           +P+A+ +L+    + +             L+AAG VT +PL+CF  A   +P + +GF Q
Sbjct: 187 VPIAIAWLLFNQTATSVQPAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYTTIGFLQ 246

Query: 247 YIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFD--MAYKRKT 293
           YI P+++ + AV LF E   +   + F FIW+ L V++ D  ++ +R+T
Sbjct: 247 YIAPTLVLLQAVLLFGEHLSSSTLVAFMFIWAGLAVYSVDAWISLRRRT 295