Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 263 a.a., Chloramphenicol-sensitive protein rarD from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (312), Expect = 2e-33
 Identities = 73/245 (29%), Positives = 133/245 (54%), Gaps = 12/245 (4%)

Query: 48  VFMVIIMMFIGGFG-KLRQLFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGY 106
           VF++ ++ F+   G + RQL +   +L V+ + + ++A  W L+++ V N+ +L+A LGY
Sbjct: 1   VFLMPLLFFVYRKGAQFRQLVRDVTKLPVVAVCAAILAVWWFLYMYCVTNNRVLEAGLGY 60

Query: 107 FINPLLNVLLGMLFLGERLRKLQWFAVALASAGV-LIQLISFGSIPIVSLALAGTFGLYA 165
           ++ P+  V++GM+FL ER+ +    +V ++ AG+    + + GS P +++ L   +  Y 
Sbjct: 61  YLGPIFTVVMGMVFLRERIDRWSAASVLVSFAGIGYYAIATQGSFPFLAIGLGLCYAGYT 120

Query: 166 LL-RKKVNVDAKSGLLVETAILLPVALVYLV-----ATLDSATANMLTNDWHLNLLLMAA 219
           +  R  VN DA+  + +E   LLP A++         +L S     LT+    N+LL   
Sbjct: 121 VYKRANVNFDAQVSVALELLALLPAAMLIFAHYVQQGSLQSFRTTSLTD----NVLLFML 176

Query: 220 GIVTTIPLLCFAGAAVRIPLSMLGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSA 279
           G++  +P+  +  A   +P   + F QYI P+  F+LAV  F EPF     I F  +W+ 
Sbjct: 177 GVINVLPMWWYTVATRNLPTVPMSFLQYISPTCNFLLAVFWFAEPFSRHSLIMFLLVWTG 236

Query: 280 LLVFT 284
           + ++T
Sbjct: 237 VGIYT 241