Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 297 a.a., EamA family transporter RarD from Serratia liquefaciens MT49

 Score =  120 bits (300), Expect = 5e-32
 Identities = 80/287 (27%), Positives = 145/287 (50%), Gaps = 11/287 (3%)

Query: 8   KGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGFGKLRQLF 67
           KGI+L+V A  ++G    Y   L  +   ++   R + +  F+ + M+    + K+ +  
Sbjct: 3   KGIVLSVIASVLFGVMYYYTSTLTPLDGEQVFGWRTLLTVPFLTLFMVLSADWRKVSETL 62

Query: 68  ----KQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLFLGE 123
               ++P++L+ L ++S L+     LF+WA  +   L+ SLGYF+ PL  VL G L   +
Sbjct: 63  SWIKQRPRRLLFLPLSSALLGVQLWLFLWAPLHGKALEVSLGYFLLPLTMVLAGRLIFRD 122

Query: 124 RLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLLVET 183
           RL  LQ  AV+ A  GV  +L   G +   +L +A  + +Y +LR++   D   GL  E 
Sbjct: 123 RLSLLQKLAVSCAIIGVGNELYQVGGVSWTTLLVALGYPVYFILRRRFGTDNLGGLWCEL 182

Query: 184 AILLPVALVYLVATLDSATANMLTND--WHLNLLLMAAGIVTTIPLLCFAGAAVRIPLSM 241
            ++LPVA  +         A  ++    W + LL    G+++   L+C+  A+  +P S+
Sbjct: 183 TLMLPVAACFAFGGNGPLAALSISPALYWQIPLL----GVISAAALVCYILASRLLPFSL 238

Query: 242 LGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMA 288
            G   Y+ P ++ ++A+ L  E    ++ +T+  IW A+L+   + A
Sbjct: 239 FGLLSYVEPVLLVVVAL-LLGESIGRDEWLTYIPIWLAVLLLVSEGA 284