Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 294 a.a., Protein rarD from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  353 bits (905), Expect = e-102
 Identities = 169/292 (57%), Positives = 225/292 (77%)

Query: 1   MPDTEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGF 60
           M   + R+G+LLA++AY +WG AP YFKL+++V A EIL HRVIWSF FMV ++     +
Sbjct: 1   MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVALLSVSRQW 60

Query: 61  GKLRQLFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLF 120
            ++++L K PK++ +L ++++L+ GNWLLFIWAVNN HML+ASLGYFINPL+N+LLGM+F
Sbjct: 61  RQVKRLLKTPKKIFLLALSAVLVGGNWLLFIWAVNNHHMLEASLGYFINPLVNILLGMIF 120

Query: 121 LGERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLL 180
           LGER R++QW AV LA  GVL+QL +FGS+PI++L LA +F  Y L+RKK+ V+A++G+L
Sbjct: 121 LGERFRRMQWLAVILAVCGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML 180

Query: 181 VETAILLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLS 240
           VET  LLPVA +YL    DS T++M  N   LNLLLMAAG+VTTIPLLCF GAA R+ LS
Sbjct: 181 VETLWLLPVAAIYLFGIADSPTSHMGQNALSLNLLLMAAGVVTTIPLLCFTGAATRLRLS 240

Query: 241 MLGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRK 292
            LGFFQYIGP++MF+LAVT + E   A+K +TF FIW AL +F  D  Y ++
Sbjct: 241 TLGFFQYIGPTLMFLLAVTFYGEVPGADKMVTFAFIWVALAIFVMDAIYTQR 292