Pairwise Alignments

Query, 294 a.a., rarD protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 295 a.a., EamA family transporter RarD from Escherichia coli ECRC98

 Score =  351 bits (901), Expect = e-101
 Identities = 167/292 (57%), Positives = 225/292 (77%)

Query: 1   MPDTEYRKGILLAVSAYCMWGFAPLYFKLLHHVSATEILLHRVIWSFVFMVIIMMFIGGF 60
           M   + R+G+LLA++AY +WG AP YFKL+++V A EIL HRVIWSF FMV++M     +
Sbjct: 1   MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVIWSFFFMVVLMSICRQW 60

Query: 61  GKLRQLFKQPKQLIVLTITSLLIAGNWLLFIWAVNNDHMLDASLGYFINPLLNVLLGMLF 120
             L+ L + P+++ +L ++++LI GNWLLFIWAVNN HML+ASLGYFINPL+N++LGM+F
Sbjct: 61  SYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIF 120

Query: 121 LGERLRKLQWFAVALASAGVLIQLISFGSIPIVSLALAGTFGLYALLRKKVNVDAKSGLL 180
           LGER R++QW AV LA  GVL+QL +FGS+PI++L LA +F  Y L+RKK+ V+A++G+L
Sbjct: 121 LGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFSFAFYGLVRKKIAVEAQTGML 180

Query: 181 VETAILLPVALVYLVATLDSATANMLTNDWHLNLLLMAAGIVTTIPLLCFAGAAVRIPLS 240
           +ET  LLPVA +YL A  DS+T++M  N   LNLLL+AAGIVTT+PLLCF  AA R+ LS
Sbjct: 181 IETMWLLPVAAIYLFAIADSSTSHMGQNPMSLNLLLIAAGIVTTVPLLCFTAAATRLRLS 240

Query: 241 MLGFFQYIGPSIMFILAVTLFNEPFDAEKSITFGFIWSALLVFTFDMAYKRK 292
            LGFFQYIGP++MF+LAVT + E   A+K +TF FIW AL +F  D  Y ++
Sbjct: 241 TLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFTFIWVALAIFVMDAIYTQR 292