Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 608 a.a., ATP-dependent DNA helicase RecQ from Methylophilus sp. DMC18

 Score =  534 bits (1375), Expect = e-156
 Identities = 286/592 (48%), Positives = 386/592 (65%), Gaps = 11/592 (1%)

Query: 17  LAQVFGYRDFRDGQREVIERVCRGEDCLVIMPTGGGKSLCYQLPALMMHGITIVVSPLIS 76
           L  VFGY  FR  Q+ ++E V  G+D LV+MPTGGGKSLCYQ+PAL   G+ IVVSPLI+
Sbjct: 10  LQDVFGYNQFRQQQQAIVEHVISGQDALVLMPTGGGKSLCYQIPALARDGLAIVVSPLIA 69

Query: 77  LMKDQVDSLLQTGVNAAYLNSSQPRELSLEVLRQLHLGELKLLYVSPERLLTADFI---- 132
           LM+DQV++L Q GVNAA+LNSS   E +  + RQ+  GE+KLLYV+PERL+   F+    
Sbjct: 70  LMQDQVEALQQLGVNAAFLNSSLSAEDNARITRQVVSGEIKLLYVAPERLMVGSFLSLLD 129

Query: 133 ERMQSLPLSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMMALTATADQATRQNI 192
           E  Q + L++FAIDEAHC+SQWGHDFRPEY  L  L   FP VP +ALTATAD  TR  I
Sbjct: 130 EVQQHVGLALFAIDEAHCVSQWGHDFRPEYRQLTILHNRFPEVPRIALTATADAPTRAEI 189

Query: 193 CERLGI-NPFKLLSSFDRPNIRYTVAEKLNAANQLRQFLLQQN-GSSGIIYCSSRRRVDE 250
             +L + N  + +SSFDRPNIRY V  K NA  QL+ FL +++   +GIIYC SRR+V+E
Sbjct: 190 ISQLNLENARQFVSSFDRPNIRYHVGIKNNARQQLQAFLEREHPNDAGIIYCLSRRKVEE 249

Query: 251 VAERLTLQGFHAKAYHAGMTPEERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHY 310
            A  L  +G+ A  YHAG+  + R   Q  FL+++  I+VAT+AFGMGI+K NVRFV H 
Sbjct: 250 TAAWLVEKGWSALPYHAGLPAQLRELHQRRFLREEGIIMVATIAFGMGIDKPNVRFVAHL 309

Query: 311 DIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQ-QQVEFHKLNT 369
           D+PKS+E YYQETGRAGRDGL+A A+M++   D+  +R +++  E   + +++E  KL+ 
Sbjct: 310 DLPKSMEGYYQETGRAGRDGLQANAWMVYGMGDVVSMRQMLDSGEASEERKRLERLKLDA 369

Query: 370 MAAFAEAQTCRRQVLLHYFDESALEPCGNCDICLDPPKRYNGSEDAQKVLSCIYRLGQRF 429
           +  + E+ TCR Q +L YF ES    CG CD CL P + +  ++ AQ  LSC+YR GQRF
Sbjct: 370 LLGYCESTTCRHQSILRYFGESHPGACGQCDNCLHPVETWQATQVAQMALSCVYRTGQRF 429

Query: 430 GINHLIEVLRGSKGAAIVDRGHDKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITRGS 489
           G+ HLI+VL G     +    HDK+ST+GIGK  +   W  V RQLI  GL   D+    
Sbjct: 430 GVGHLIDVLIGKVTPQVERFNHDKVSTFGIGKTLNQNQWSGVYRQLIAAGLLEADMAAYG 489

Query: 490 SITLNPSARPILKGEVALML---AEPRIQLTSIKRKT-TQSRVPLNYDRKLFARLKTLRR 545
            + L  +ARP+LKGE  + L   AEP  +++  +R    +       D  L+  LK  R 
Sbjct: 490 GLKLTEAARPVLKGEQEVWLRRDAEPEKRMSKAERSARAKEAFEGANDDPLWQALKAKRL 549

Query: 546 EIAEEQDVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGGEFL 597
           E+A EQ VPPY++F+D+TL E+    P +  EM  ++G+G+ KL ++G  FL
Sbjct: 550 ELAREQGVPPYVIFHDSTLLEIHNRKPQTLDEMGQISGIGQAKLQKYGDAFL 601