Pairwise Alignments

Query, 607 a.a., ATP-dependent DNA helicase RecQ (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  497 bits (1279), Expect = e-145
 Identities = 261/594 (43%), Positives = 380/594 (63%), Gaps = 11/594 (1%)

Query: 15  ERLAQVFGYRDFRDGQREVIERVCRGEDCLVIMPTGGGKSLCYQLPALMMHGITIVVSPL 74
           E L   +GY  FR  Q  +I+ + + +D +V+MPTGGGKS+CYQ+PA++  G+T+V+SPL
Sbjct: 6   EVLKNFYGYDSFRGQQEAIIQSILKQQDTIVLMPTGGGKSVCYQIPAMVNDGLTLVISPL 65

Query: 75  ISLMKDQVDSLLQTGVNAAYLNSSQPRELSLEVLRQLHLGELKLLYVSPERLLTADF--I 132
           I+LMKDQVD+L   G+ AAYLNSSQ       V  ++  G+LKLLYV+PERL    F   
Sbjct: 66  IALMKDQVDALNGMGIPAAYLNSSQSASEQRFVSEEIRSGKLKLLYVAPERLFGGAFPLT 125

Query: 133 ERMQSLPLSMFAIDEAHCISQWGHDFRPEYAALGQLKQLFPHVPMMALTATADQATRQNI 192
           E +++  LS+ AIDEAHC+SQWGHDFRP+Y  +G+L+Q  P VP +ALTATAD+ TR +I
Sbjct: 126 ETLKTSRLSLVAIDEAHCVSQWGHDFRPDYLMIGRLRQELPDVPFVALTATADKQTRADI 185

Query: 193 CERLGIN-PFKLLSSFDRPNIRYTVAEKLNAANQLRQFLLQQNGSSGIIYCSSRRRVDEV 251
            ++LG+  P   +SSFDRPNI Y +  K N+  +L  FL     +SGIIYC SR+ V+++
Sbjct: 186 ADKLGLRKPKWFISSFDRPNITYRIVPKRNSFEKLLDFLEYHQKNSGIIYCLSRKNVEDM 245

Query: 252 AERLTLQGFHAKAYHAGMTPEERGEVQDSFLKDQIDIVVATVAFGMGINKSNVRFVVHYD 311
           A RL   G  A  YHAG+  + R   Q+ F+KD++ I+VAT+AFGMGI+KSNVRFVVH +
Sbjct: 246 AGRLQAAGLSALPYHAGLDRQTRASHQEKFIKDKVKIMVATIAFGMGIDKSNVRFVVHMN 305

Query: 312 IPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLIEQSEPGPQQQVEFHKLNTMA 371
           +P++IE YYQETGRAGRDGL ++A + +  AD+  ++ +I+  +     +V   KL  M 
Sbjct: 306 MPQNIEGYYQETGRAGRDGLPSDALLFYSYADVMTLQRMIDTPDNPDYSEVMLAKLEKMK 365

Query: 372 AFAEAQTCRRQVLLHYFDESALEPCGNCDICLDPPKRYNGSEDAQKVLSCIYRLGQRFGI 431
            F ++ TCRR+ LL YFDE   + CGNCD CL    + + +  AQ +LS I RL + +G+
Sbjct: 366 QFCQSNTCRRRYLLGYFDEEEQKDCGNCDRCLSKDNKQDMTVPAQMLLSTIVRLKENYGL 425

Query: 432 NHLIEVLRGSKGAAIVDRGHDKLSTWGIGKDKSHEYWLSVIRQLIHLGLASQDITRGSSI 491
            + + VLRGSK A + +  H  L+ +GIGK+KS ++W  + + L   G  ++  T+  ++
Sbjct: 426 GYCVLVLRGSKSAKVQEE-HKALTVYGIGKEKSEDFWKKLGQHLQQEGYLAEAGTQFPTL 484

Query: 492 TLNPSARPILKGEVALMLAEPRIQLTSIKRKTTQSRVPLNYDRKLFARLKTLRREIAEEQ 551
            L   A   LKG+   +L   ++       + T     + Y+  LF  LK +R  +A+++
Sbjct: 485 KLTTIAWEKLKGKKKFLL---QMGEGGFDHQPT----TVAYEEGLFEELKRIRFGLAQKE 537

Query: 552 DVPPYLVFNDATLAEMAAMMPTSPGEMLAVNGVGERKLSRFGGEFLDEIAAYLA 605
           +VPPY++F+D TL EMA  +P      L ++GVG+RK   +   FL  I +Y A
Sbjct: 538 NVPPYVIFSDNTLVEMAQYLPHDHDSFLQISGVGQRKAENYEDHFLPVIKSYAA 591