Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 381 a.a., homocitrate synthase from Magnetospirillum magneticum AMB-1

 Score =  187 bits (475), Expect = 6e-52
 Identities = 117/341 (34%), Positives = 177/341 (51%), Gaps = 12/341 (3%)

Query: 5   VIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIART 64
           +++ DTTLRDGEQ    +  + EKL IA  L+  GV  +EVG P     +  +++ +A  
Sbjct: 7   IVMNDTTLRDGEQTAGVAFRLDEKLDIARTLDIAGVPEIEVGIPAMGAEEQAAIRKVAGL 66

Query: 65  IKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMAVG 124
              +R+ A  R +E D++AAA    + +   ++  I  S + + +K+ R     LE    
Sbjct: 67  GLKARLIAWCRMMEDDLEAAA----LCDVATVNLSIPVSDLQLAAKMGRDRAWALEHIRV 122

Query: 125 AVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGSII 184
            V  AR    DV    ED+ R     L  +V A   AGA+     DT+G   P      +
Sbjct: 123 MVGKARAMGFDVLVGGEDSSRADPAFLADVVRACEAAGAQRFRFADTMGIMDPFA----V 178

Query: 185 QTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLEEI 244
              F  +       + +H HDDLGL+ ANS+ AV+ GA  +  T+NG+GERAGN  LEE+
Sbjct: 179 HDAFRALRAATSMELEIHAHDDLGLATANSLAAVRGGATHVSTTVNGLGERAGNAPLEEV 238

Query: 245 AMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQDGM 304
            + L    +L G ETGI+ +++ R S LV++    P+  +K+IVG N FTH SGIH  G+
Sbjct: 239 VVALG---HLYGRETGIDKRQLGRVSKLVAEASGRPVPVDKSIVGENIFTHESGIHVSGL 295

Query: 305 LKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMG 345
           L+   TY+ + P  +G   + L +   SG   + H   E+G
Sbjct: 296 LRDPRTYQALDPAELG-RGHRLVLGKHSGLTSVLHACREIG 335