Pairwise Alignments

Query, 522 a.a., 2-isopropylmalate synthase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 384 a.a., 2-isopropylmalate synthase (EC 2.3.3.13) from Kangiella aquimarina DSM 16071

 Score =  398 bits (1023), Expect = e-115
 Identities = 202/379 (53%), Positives = 271/379 (71%), Gaps = 5/379 (1%)

Query: 3   NRVIIFDTTLRDGEQALAASLSVKEKLQIAMALERLGVDVMEVGFPVSSPGDFESVQTIA 62
           ++++IFDTTLRDGEQ+  AS+  +EKL+IA  LE + VDV+E GF ++SPGDFE+V+ +A
Sbjct: 5   DKLVIFDTTLRDGEQSPGASMDKEEKLEIAKQLELMKVDVIEAGFAIASPGDFEAVKLVA 64

Query: 63  RTIKNSRVCALSRALEKDIDAAAQALSVAEQFRIHTFISTSTIHVESKLKRSFEQVLEMA 122
             IK+S +C+LSRA+EKDI AA  AL  A   RIHTFI+TS +H++ KL+   EQV+E A
Sbjct: 65  DNIKDSTICSLSRAMEKDIQAAGDALKGANSGRIHTFIATSPLHMKYKLQMEPEQVIEHA 124

Query: 123 VGAVKYARRFTDDVEFSCEDAGRTPIDNLCRMVEAAIHAGARTINIPDTVGYTVPSEFGS 182
           V +VK+AR   +DVEFSCEDAGR+ +D +C+++E  I AGARTINIPDTVGY +P ++ +
Sbjct: 125 VKSVKFARSLCEDVEFSCEDAGRSELDFMCKIIEQVIDAGARTINIPDTVGYNLPDQYAN 184

Query: 183 IIQTLFNRVPNIDQAIISVHCHDDLGLSVANSITAVQHGARQIECTMNGIGERAGNCSLE 242
            I+ L  R+PN D+AI SVHCH+DLGL+VANS+ AVQ GARQ+ECT+NG+GERAGN SLE
Sbjct: 185 TIEQLIQRIPNSDKAIFSVHCHNDLGLAVANSLAAVQKGARQVECTINGLGERAGNASLE 244

Query: 243 EIAMILATRKNLLGFETGINAKEIHRTSNLVSQLCNMPIQSNKAIVGANAFTHSSGIHQD 302
           E+ M + TR +    E  I+ + I  TS LVS++    +Q NKAIVG NAF H SGIHQD
Sbjct: 245 EVVMAIKTRPDYFDVEVDIDTRHIVPTSQLVSKITGFAVQPNKAIVGDNAFAHESGIHQD 304

Query: 303 GMLKAQNTYEIMTPESIGLNRNNLNMTSRSGRHVIKHRMEEMGYSSQDYNLDALYEQFL- 361
           G+LK + TYEIM  E +G   N + +   SGR+  K  + ++G   Q  N D L++ F+ 
Sbjct: 305 GVLKHRETYEIMRAEDVGWANNRMVLGKHSGRNAFKSHLAQLGV--QFDNNDDLHDAFVA 362

Query: 362 --HLADKKGQVFDYDLEAL 378
              LAD+K  + D DL  L
Sbjct: 363 FKKLADQKHDILDEDLLTL 381