Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 210 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 2e-37
 Identities = 68/188 (36%), Positives = 118/188 (62%), Gaps = 4/188 (2%)

Query: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAGCVILDSRMPEITGQEV 66
           +Y+VDDD+ + DS  ++L+  G Q   F+SG+ FL  C      CV+LD RMP + G  V
Sbjct: 6   VYVVDDDQGMRDSTVWLLQSVGLQALPFASGQAFLDACVDDGPACVLLDVRMPGLGGLAV 65

Query: 67  QQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKES--- 123
           QQ + E    + VIF++GH D+P+ + AF+ GACDF +KP + + L+ +++ A + +   
Sbjct: 66  QQAMRERGLMVPVIFVSGHADVPIVVRAFKAGACDFIEKPYNDQLLLDSVQAALEHAGLA 125

Query: 124 -QASFEQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMKKLE 182
            Q       +Q +   LT RE+ V   + QG+ N++I+E + +S++T++++R ++MK+L+
Sbjct: 126 RQGDQALALVQARIDGLTPRERDVFVPLAQGLNNREIAEQLGISVKTVDLYRGRVMKRLQ 185

Query: 183 VSNMAELV 190
             ++AELV
Sbjct: 186 AGSLAELV 193