Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 209 a.a., Two-component response regulator from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  124 bits (311), Expect = 1e-33
 Identities = 71/198 (35%), Positives = 114/198 (57%), Gaps = 11/198 (5%)

Query: 7   LYLVDDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLTQAG-----CVILDSRMPEI 61
           +YLVDDD  +  +L ++LR      + + S   F A   +         CV+LD RMP +
Sbjct: 9   VYLVDDDAEVRQALAWLLRTRRLLSEGYDSAETFEADAAVWTGAPEAPCCVVLDVRMPGL 68

Query: 62  TGQEVQQKLLET--QSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKA 119
           +G  + ++LL+   Q+ + VIFL+GH D+P A+ A ++GA DF +KP S  ALV  +++A
Sbjct: 69  SGLALFERLLQLPWQAAVPVIFLSGHADVPTAVDAVKRGAFDFCEKPFSDNALVDRVEQA 128

Query: 120 HKESQASFEQQ----SLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRA 175
              S     QQ     LQ +   LTDRE+ V+  V+ G+ NK +++ + +S+RT+EVHR+
Sbjct: 129 LDRSAEVLAQQRVKRELQQRLNSLTDRERDVMDLVIAGLPNKLVADQLNISVRTVEVHRS 188

Query: 176 KIMKKLEVSNMAELVQHL 193
           ++  K+ V +  EL   L
Sbjct: 189 RVFDKMGVKSAVELANVL 206