Pairwise Alignments

Query, 202 a.a., DNA-binding response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 489 a.a., DNA-binding response regulator from Magnetospirillum magneticum AMB-1

 Score =  140 bits (354), Expect = 3e-38
 Identities = 80/197 (40%), Positives = 124/197 (62%), Gaps = 6/197 (3%)

Query: 6   PLYLV-DDDEAILDSLGFMLRQFGYQVQTFSSGRDFLAQCPLT-QAGCVILDSRMPEITG 63
           PL LV DDD+A+  S+ F+L   G   + F++   FLAQ P   + GCVILD RMP ++G
Sbjct: 292 PLVLVVDDDDAMRGSVAFLLASVGLDSRGFATAEAFLAQLPDDGRPGCVILDVRMPGMSG 351

Query: 64  QEVQQKLLETQSPLGVIFLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIKKAHKES 123
            E+Q+ L E +  L ++ +TGHGD+PMA+SA + GA DF +KP + + L+ A+  A + S
Sbjct: 352 LELQRLLAERKFVLPLVIVTGHGDVPMAVSALKAGAHDFIEKPFNDQVLLDAVTAAIRAS 411

Query: 124 QASF----EQQSLQHKFAQLTDREQQVLAHVVQGMTNKQISEAMYLSLRTIEVHRAKIMK 179
           +        +  ++ + A LT RE++VL  V+ G  NKQI+  + LS++T+EVHR  +M+
Sbjct: 412 REKLADAANRDVVEKRLASLTRREREVLDRVLAGKPNKQIAFDLDLSIKTVEVHRHAVME 471

Query: 180 KLEVSNMAELVQHLAHL 196
           K+   ++AEL Q +  L
Sbjct: 472 KMAARSVAELAQLMVGL 488