Pairwise Alignments

Query, 208 a.a., cytochrome c family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 217 a.a., Cytochrome c-type protein from Pseudomonas putida KT2440

 Score =  138 bits (348), Expect = 7e-38
 Identities = 76/175 (43%), Positives = 100/175 (57%), Gaps = 5/175 (2%)

Query: 33  PAGQICVSCHGVEGEGVEPLG-PRLAGLSKEYITTQLQHFQAGVRQNATMMPMAMTLQGD 91
           PA   C+ CHG +G G+   G PRLAGL   Y+  QLQ ++ G R+   M P+A  L  D
Sbjct: 37  PAAMACLGCHGPDGNGIAAAGFPRLAGLPAGYLAKQLQDWRNGSRKQPVMEPLAKALSDD 96

Query: 92  GIEQVASYFSAKSPKTEVKPVLRGTHVTFSDDTARLAYQGDWSRGLPACVTCHGPSGLG- 150
            I+ V++Y  A  P      + R       D T R+A  GDWSR +P CV CHGP G G 
Sbjct: 97  EIKAVSTYL-ASLPAVPAGDLHR--QQIADDPTTRMALYGDWSRQIPGCVQCHGPGGGGV 153

Query: 151 GDLFPRLAGQQASYIKTQLLAWQAGTRKGDVDGMMANVANKLTAAEVDALANYFA 205
           G+ FP LAGQ ASY+  QL AW+ G+R  D + +M  VA  +T  E+ A+A +FA
Sbjct: 154 GEHFPPLAGQPASYLVAQLNAWRDGSRSNDPNQLMVGVAKAMTDEEIKAVAEFFA 208



 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 123 DTARLAYQGDWSRGLPACVTCHGP--SGLGGDLFPRLAGQQASYIKTQLLAWQAGTRKGD 180
           D  ++  QG  +    AC+ CHGP  +G+    FPRLAG  A Y+  QL  W+ G+RK  
Sbjct: 25  DGQKVFTQGGANPAAMACLGCHGPDGNGIAAAGFPRLAGLPAGYLAKQLQDWRNGSRKQP 84

Query: 181 VDGMMANVANKLTAAEVDALANYFANI 207
           V   M  +A  L+  E+ A++ Y A++
Sbjct: 85  V---MEPLAKALSDDEIKAVSTYLASL 108