Pairwise Alignments

Query, 349 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 311 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 53.1 bits (126), Expect = 9e-12
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 38  HAQLGLLFISVAVLFWGMLPIALKLSGSFIDPVTLTWFRFLVALIVSILVQWSAGSLK-Q 96
           H + G+  +    L  G L I L+ +G    P+T  WFR    L+   L  W A + + +
Sbjct: 20  HERAGMWLMVAGGLMLGTLGIFLEEAGQ--SPLTAVWFRCAFGLLA--LTAWFAVTRRWK 75

Query: 97  FAALDAKVWLRLILAGLFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKER 156
              L     L  + AG+  ++N+V F  +++  + G A +     PF +   G L++KER
Sbjct: 76  ELRLTGAARLAAVSAGVLAVINWVLFFEAIERTSIGVATVVVHVQPFLVMAFGALWWKER 135

Query: 157 LNAIQ----LSCFASLAL 170
           +  +Q    L+C   LAL
Sbjct: 136 ITRVQAAATLACLVGLAL 153