Pairwise Alignments

Query, 349 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 304 a.a., FIG00761799: membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 53.5 bits (127), Expect = 7e-12
 Identities = 32/132 (24%), Positives = 69/132 (52%), Gaps = 1/132 (0%)

Query: 42  GLLFISVAVLFWGMLPIALK-LSGSFIDPVTLTWFRFLVALIVSILVQWSAGSLKQFAAL 100
           G +F+ +A + WG+ P+  + LSG  +  + +    + + L++++ + +   +    A  
Sbjct: 8   GTMFVVLAFILWGLTPLYYQYLSGGNLAQILIYRVFWSIPLLLAVRLLFRQRTRFHDAWK 67

Query: 101 DAKVWLRLILAGLFLMLNYVSFVYSLDYLAPGAAQLNFQTSPFFLAFGGVLFFKERLNAI 160
           D K +   ++AGL +++++ SF+Y+L +     A L +  +P F+   G +F KE+L+  
Sbjct: 68  DKKSFFFCMIAGLLMIVSWSSFIYALTHHLVLDASLGYFINPLFVIALGCIFLKEKLSLF 127

Query: 161 QLSCFASLALGM 172
           Q     S   G+
Sbjct: 128 QAIAVFSGVCGL 139