Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 215 a.a., two-component system response regulator NarL from Paraburkholderia sabiae LMG 24235

 Score =  171 bits (434), Expect = 7e-48
 Identities = 91/199 (45%), Positives = 126/199 (63%), Gaps = 1/199 (0%)

Query: 4   PYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGM 63
           P++VL++DDH L RKG+ QLI  +P F + GE  SG D +      +PD+VL+DLNM  M
Sbjct: 3   PHTVLLIDDHALFRKGVAQLIQMNPAFEVTGEATSGQDGIDMAVRLKPDVVLIDLNMPRM 62

Query: 64  TGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMS 123
            G++TL  MRQ GV +R ++LTVSD ++DV+  LRAGA GYLLKD +P+ L   L+  + 
Sbjct: 63  NGIETLEGMRQAGVDARFIMLTVSDNERDVVAALRAGAHGYLLKDMDPEDLCVSLQKALK 122

Query: 124 GHRVISEEV-AEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGT 182
           G  V+SE V    ++ L          + LT RE+++   L  GL N+ I+  L IS GT
Sbjct: 123 GTAVLSESVTGSLVHALSGGQRIPAAQNDLTAREVEVFDYLVAGLCNKAIARKLDISVGT 182

Query: 183 VKVHVKNLLRKANAKSRTE 201
           VKVHVK++LRK +  SR E
Sbjct: 183 VKVHVKHVLRKLDLHSRLE 201