Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., response regulator transcription factor from Paraburkholderia sabiae LMG 24235

 Score =  119 bits (299), Expect = 3e-32
 Identities = 70/205 (34%), Positives = 113/205 (55%), Gaps = 6/205 (2%)

Query: 1   MGKPYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNM 60
           M K + VL+ +D PLLR G+C ++     +S+ GE   G++A S  A   PD++L+DL+M
Sbjct: 1   MDKIHRVLIAEDQPLLRGGLCSMVRRLQQYSVAGEARDGVEACSLAAALLPDLILMDLSM 60

Query: 61  KGMTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKN 120
            G +G+D +  +++     RI+ LT+  +   +   L AG DGY+LKD   D L++ ++ 
Sbjct: 61  PGKSGVDAIAQIKRHTPQIRIIALTIHASDMHMREALAAGVDGYVLKDASFDELVEAMRL 120

Query: 121 TMSGHR--VISEEVAEYLYE---LKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEH 175
            M G R   + E  A +        N    Q W S+LT RE  +L+ +AEG +NR + E 
Sbjct: 121 VMLGRRNPTLDEYGARHGEPPGLAANTEHAQTW-SALTGRERSVLRLVAEGCTNREVGEQ 179

Query: 176 LHISEGTVKVHVKNLLRKANAKSRT 200
           L +S  T++ H  +L+RK    + T
Sbjct: 180 LRLSPKTIEKHRASLMRKLGVSNAT 204