Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 230 a.a., Nitrate/nitrite response regulator protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  152 bits (385), Expect = 4e-42
 Identities = 85/217 (39%), Positives = 127/217 (58%), Gaps = 15/217 (6%)

Query: 3   KPYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKG 62
           +P  +LVVDDH L R+G+  L+  D  F + GE G   +AL  VA   PD++LLD ++ G
Sbjct: 7   RPIQLLVVDDHSLFRRGLMALLAQDLRFEVIGEAGDVGEALRCVARQRPDVILLDNHLPG 66

Query: 63  MTGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTM 122
           + G+D + A+R+    SR+++LTVS+ + D++  L+AGADGYLLK  E   L + +   M
Sbjct: 67  VLGVDAIPALREAAPGSRVLMLTVSENEADLVAALKAGADGYLLKTVESHHLCEAIVKVM 126

Query: 123 SGHRVISEEVAEYLYELKNA---------------ADEQEWVSSLTPRELQILQQLAEGL 167
            G  V+S E+   L     A               A     ++SL+ REL+IL  +A G 
Sbjct: 127 EGESVVSPEMTTKLVSALRAQPTVNGNGEGGGATVATADAELASLSVRELEILHLIARGD 186

Query: 168 SNRMISEHLHISEGTVKVHVKNLLRKANAKSRTEMAV 204
           SN++I+  L I+E TVK+HV+++LRK N  SR + AV
Sbjct: 187 SNKLIARQLDIAETTVKIHVQHILRKLNLTSRVQAAV 223