Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 210 a.a., nitrate/nitrite response regulator protein NarP from Pectobacterium carotovorum WPP14

 Score =  203 bits (517), Expect = 2e-57
 Identities = 103/203 (50%), Positives = 143/203 (70%), Gaps = 4/203 (1%)

Query: 5   YSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMT 64
           Y VL+VDDHPL+R+GI QL+ +D  F + GE  +G++ALS    D PDI+LLDLNMKG++
Sbjct: 7   YRVLIVDDHPLMRRGIRQLLATDAIFDVIGEASNGMEALSLANRDSPDIILLDLNMKGLS 66

Query: 65  GLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSG 124
           GLDTL+A+R++G+ +R+++LTVSDA  D+  L+ AGADGYLLKD+ P+ LLD ++N    
Sbjct: 67  GLDTLHALRRDGICARVIVLTVSDAPSDIYALMDAGADGYLLKDSAPEHLLDAIRN---- 122

Query: 125 HRVISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTVK 184
               SE+V + L       D     + LT REL +LQ++A GLSN+ I+  L+ISE TVK
Sbjct: 123 GDAFSEQVRDVLRHRIAIQDTPSPFTVLTERELDVLQEVASGLSNKQIASVLYISEETVK 182

Query: 185 VHVKNLLRKANAKSRTEMAVRYL 207
           VH++N+LRK N +SR    V YL
Sbjct: 183 VHIRNMLRKLNVRSRVAATVLYL 205