Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 216 a.a., two-component system response regulator NarL from Serratia liquefaciens MT49

 Score =  176 bits (446), Expect = 3e-49
 Identities = 91/201 (45%), Positives = 130/201 (64%), Gaps = 2/201 (0%)

Query: 6   SVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMTG 65
           ++L++DDHP+LR G+ QLI  DP   +  E G+G   +S     +PD++LLDLNM G+ G
Sbjct: 8   TILLIDDHPMLRNGVKQLIGMDPRLQVIAEAGNGEQGVSLAEEHDPDLILLDLNMPGING 67

Query: 66  LDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSGH 125
           L+TL+ +R   ++ RIV+ +VS+ + DV+  L+ GADGYLLKD EP+ LL  L    +G 
Sbjct: 68  LETLDRLRMTALSGRIVVFSVSNHEDDVVSALKRGADGYLLKDMEPEELLKALHQAAAGQ 127

Query: 126 RVISEEVAEYLYE--LKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTV 183
            V+SE +   L     +N    +  +  LTPRE  IL+ +A+GL N+MI+  L I+E TV
Sbjct: 128 MVLSEALTPILAASLRENRPSAERDIQQLTPRERDILKLIAQGLPNKMIARKLTITESTV 187

Query: 184 KVHVKNLLRKANAKSRTEMAV 204
           KVHVK+LL+K   KSR E AV
Sbjct: 188 KVHVKHLLKKMKLKSRVEAAV 208