Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 215 a.a., two-component system response regulator NarL from Dickeya dianthicola 67-19

 Score =  169 bits (428), Expect = 4e-47
 Identities = 89/201 (44%), Positives = 131/201 (65%), Gaps = 2/201 (0%)

Query: 6   SVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGMTG 65
           +VL++DDHP+LR G+ QL++  PD S+ GE   G   ++     +PD++LLDLNM GM G
Sbjct: 7   TVLLIDDHPMLRNGVKQLLSMAPDLSVVGEASHGEQGVTLAEQLDPDLILLDLNMPGMNG 66

Query: 66  LDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMSGH 125
           L+TL  +R+  ++ RIV+ TVS+ ++DVI   + GADGYLLKD EP+ LL  L    +G 
Sbjct: 67  LETLARLRETPLSGRIVVFTVSNHEEDVISAFKNGADGYLLKDMEPEDLLVALHQAAAGK 126

Query: 126 RVISEEVAEYLYE--LKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTV 183
            V+S+ +   L     +  + +   +  LTPRE  IL+ +A+GL N++I+  L I+E TV
Sbjct: 127 MVLSDTLTPVLAASLRETRSSDARDIQQLTPREKDILKLIAQGLPNKVIARKLTITESTV 186

Query: 184 KVHVKNLLRKANAKSRTEMAV 204
           KVHVK+LL+K   +SR E AV
Sbjct: 187 KVHVKHLLKKMKLRSRVEAAV 207