Pairwise Alignments

Query, 209 a.a., DNA-binding nitrate/nitrite response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 215 a.a., response regulator in two-component regulatory system with NarQ from Escherichia coli BL21

 Score =  214 bits (546), Expect = 7e-61
 Identities = 105/204 (51%), Positives = 148/204 (72%)

Query: 4   PYSVLVVDDHPLLRKGICQLITSDPDFSLFGEVGSGLDALSSVATDEPDIVLLDLNMKGM 63
           P+ V++VDDHPL+R+G+ QL+  DP F +  E G G  A+      + D++LLDLNMKGM
Sbjct: 6   PFQVMIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANRLDIDVILLDLNMKGM 65

Query: 64  TGLDTLNAMRQEGVTSRIVILTVSDAKQDVIRLLRAGADGYLLKDTEPDLLLDKLKNTMS 123
           +GLDTLNA+R++GVT++I+ILTVSDA  DV  L+ AGADGYLLKD++P++LL+ ++    
Sbjct: 66  SGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125

Query: 124 GHRVISEEVAEYLYELKNAADEQEWVSSLTPRELQILQQLAEGLSNRMISEHLHISEGTV 183
           G +V SE V +YL E +    E++  S LT REL +L +LA+GLSN+ I+  L+ISE TV
Sbjct: 126 GSKVFSERVNQYLREREMFGAEEDPFSVLTERELDVLHELAQGLSNKQIASVLNISEQTV 185

Query: 184 KVHVKNLLRKANAKSRTEMAVRYL 207
           KVH++NLLRK N +SR    + +L
Sbjct: 186 KVHIRNLLRKLNVRSRVAATILFL 209