Pairwise Alignments

Query, 808 a.a., ribonuclease R (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 863 a.a., ribonuclease R from Ralstonia solanacearum PSI07

 Score =  694 bits (1792), Expect = 0.0
 Identities = 381/856 (44%), Positives = 524/856 (61%), Gaps = 66/856 (7%)

Query: 17  PIPSREYIIEYLRSQKSPITRDSIAAALQIHDEEQLEALRRRLRAMERDGELVFTRGQSY 76
           PIPSRE I+  LR+  SP++   IA AL +  +E  +   +RL AMERDG+L   R   Y
Sbjct: 7   PIPSREEILGVLRTSGSPLSAADIAKALSVTRKEH-DGFIKRLTAMERDGQLELNRKGRY 65

Query: 77  GLPEKMDLISGTVLGHKEGYGFFKPDEGGDDLFISNRDMLMYFHGDKVLAQKVGMDRKGR 136
            L  + + I G V+GH++GYGFF  D+G  D+F+  R+M    HGD+ L + +G DR+GR
Sbjct: 66  ELAHQPNFIEGRVVGHRDGYGFFIRDDGEPDIFLPEREMQKAMHGDRALVRVIGYDRRGR 125

Query: 137 REARIVRLIQPRSAAIVGRFHVDSGMAFVIADDKRITQEILIASEDRNGARQGDVVVVEL 196
            E +IV +++  +  ++GR   +SG   V  +DKR+ ++ILIA + +  A+ G VV VE+
Sbjct: 126 SEGQIVEILERANRYVIGRLLSESGTLVVAPEDKRLGRDILIAPKGQGKAKVGQVVSVEI 185

Query: 197 TRRPGRFVKAAGKVTEVLGKQMAPGMEIEIALRNYDLPHTWSAAIEKKLRRIPDEVTESD 256
              P R+V+  G+V EVLG+   PGMEIEIA+R Y +PH ++ A +++   +PDEV E+D
Sbjct: 186 LEYPDRYVQPIGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFAEAAQRESEALPDEVRETD 245

Query: 257 KVGRVDLRSLPLVTIDGEDARDFDDAVYAE---VKPSGGWRLWVAIADVSYYVRTDSALD 313
             GR+DLR +PLVTIDGEDARDFDDAVY E   +  S GWRL VAIADVS+YV+   ALD
Sbjct: 246 LAGRIDLRDVPLVTIDGEDARDFDDAVYCEPVKIGRSKGWRLVVAIADVSHYVQPGKALD 305

Query: 314 TEARARGNSVYFPSQVIPMLPEKISNGLCSLNPHVDRLCMVAEMTISARGKLSGYKFYPA 373
            +A  R  SVYFP +VIPMLPEK+SNGLCSLNP VDRLCMV +  I+A+G++  Y+FYPA
Sbjct: 306 VDAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDAVITAKGQIKAYQFYPA 365

Query: 374 VMHSHARFTYTQVAAMLEG--GPIAPEHEALFVHLQCLQSLYLALDEQRAERGAIAFETI 431
           VMHS AR TY +V ++L    GP A +   L  HLQ L  L+  L + R ERGAI F+T 
Sbjct: 366 VMHSAARLTYNEVWSILSNVKGPEAAKRAPLVPHLQDLYELFQVLLKARRERGAIDFDTT 425

Query: 432 ETQFIFNDQRKIDKIVPRARNQAHKIIEECMILANVSAAKFVKKHKGEILYRVHESPSEQ 491
           ET  + N Q KI++I+PR RN AH++IEECM+ ANV AA+ ++++K   LYRVH  P+E+
Sbjct: 426 ETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAELLERYKHPALYRVHAGPTEE 485

Query: 492 KLANFKEFLAERGLSMGGGLEPTPADYQNVMLQIADRPDAELIQVMLLRSMRQAIYTPDN 551
           KL   + FL   GL++GGG +P  ADY  +M +I  RPDA ++Q MLLRSM+QA+Y+PDN
Sbjct: 486 KLQALRAFLKTSGLTLGGGDKPQAADYAELMEKIVARPDAPMLQTMLLRSMQQAVYSPDN 545

Query: 552 EGHFGLALEEYAHFTSPIRRYPDLVLHRVIRYLL----------------------AKEK 589
            GHFGLA E YAHFTSPIRRYPDL++HR I+ +L                      A+  
Sbjct: 546 IGHFGLAYEAYAHFTSPIRRYPDLLVHRAIKAVLHHSRYVPALASGVQLNSGLSLKARRM 605

Query: 590 GEANEKWTPDGGYHYQLDEL--DQLGEECSTTERRADEATRDVSDWLKCEFMQDHVGDTF 647
               +K TP         E    +LG  CS  ERRADEA+RDV  WLKC FM+D +G+ F
Sbjct: 606 QAEADKATPAAVASKAKVEAIWHELGVHCSANERRADEASRDVEAWLKCYFMRDKLGNEF 665

Query: 648 EAVIASVTNFGLFVRLNDLFIDGLVHISSLGSDYYQFDPMRQRLIGEHTGQVYQVGDPVT 707
              +++VT+FG+FV+L++L+++GLVH++ LGSDY+QFD  R  L GE TG  Y++ D V 
Sbjct: 666 SGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQFDEARNELRGERTGIRYRLTDRVR 725

Query: 708 VKVAAVNLDDRQIDLMML--------------GDSGKGGRRKAAPSRDKPMTARERVNRE 753
           V++  V+LD R++D  ++              G   +   R+ A +   P   R++  + 
Sbjct: 726 VQLLRVDLDARKMDFRLIQEPSVKAMRPAKVTGAPQEAAARQPAVATPAPPVGRKKPRQL 785

Query: 754 GAKMAKTAKSSGAKSKA----------------------GSGKAASKSKSKAGTKPKKSV 791
            A +  TAK   +  +                          K A K  +   TKPK   
Sbjct: 786 AALLGGTAKPEESFDETLDRVFEEQPVFEPGPRALPPGHAHAKPARKKPAARTTKPKTGG 845

Query: 792 KDTAKKPKAAKRSTRK 807
           K   +K       +RK
Sbjct: 846 KTVTRKVAGKSIRSRK 861