Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Paraburkholderia sabiae LMG 24235

 Score =  249 bits (635), Expect = 5e-71
 Identities = 128/245 (52%), Positives = 167/245 (68%), Gaps = 3/245 (1%)

Query: 1   MKKQDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVL 60
           M +  +++G HAV A L+H P  + E++  Q R D R+T  +  AK  G  +       L
Sbjct: 1   MSRLKVLYGFHAVTARLRHDPSSVEEIYYDQTRRDRRMTEFLGVAKEAGVRLIAADETRL 60

Query: 61  DEKAESTQHQGIVARVKAAKILAEHDLDELLAKTDLP-FLLILDGVTDPHNLGACLRNAD 119
              A + +HQG+VAR  A  +    +L ELL     P  LL+LDG+TDPHNLGACLR AD
Sbjct: 61  WGLAHTERHQGVVAR--AGDLPLAQNLAELLDGIQGPALLLVLDGITDPHNLGACLRVAD 118

Query: 120 AAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGE 179
           AAG   +I P+D +VGL A  +KVA GAA+TVP   VTNLAR +R L++ GVW+VGTAGE
Sbjct: 119 AAGAHAVIAPRDRAVGLNATAAKVASGAADTVPYITVTNLARALRELKDAGVWVVGTAGE 178

Query: 180 ADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFE 239
           A   LY+  L GP+A+ MGAEG+G+RRL+R+ CD ++ IPM+GSV SLNVSVA+G+CLFE
Sbjct: 179 ATASLYETKLDGPVALVMGAEGEGMRRLTRDTCDEVMQIPMAGSVESLNVSVASGVCLFE 238

Query: 240 AVRQR 244
           AVRQR
Sbjct: 239 AVRQR 243