Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 247 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  244 bits (623), Expect = 1e-69
 Identities = 124/246 (50%), Positives = 172/246 (69%), Gaps = 2/246 (0%)

Query: 1   MKKQDIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVL 60
           M    ++FG HAV   LK +P+ IIE++    R D R+   + +A+     +       +
Sbjct: 1   MSSPKVLFGFHAVGVRLKTAPQSIIEIYYEPTRRDARMRQFLDKAREANARLIEADGLRI 60

Query: 61  DEKAESTQHQGIVARVKA-AKILAEHDLDELLAKTDLP-FLLILDGVTDPHNLGACLRNA 118
            + A S  HQG+ ARV+A A++ +  DL E L  T +P  LL+LDG+TDPHNLGACLR A
Sbjct: 61  AKLAGSHGHQGVAARVEAVAQVRSLDDLLEQLEPTGIPPLLLVLDGITDPHNLGACLRVA 120

Query: 119 DAAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAG 178
           D AG   +I PKD++ G+ A V+KVA GAAET+P F VTNLART+  L+E+ +W++GT+ 
Sbjct: 121 DGAGAHAVIAPKDHAAGINATVAKVASGAAETMPYFMVTNLARTLGELKERNIWVIGTSD 180

Query: 179 EADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLF 238
           +A   LYQ DLKGP+A+ +GAEG G+R+L+R+ CD LVSIPM+G+V SLNVSVA+G+CL+
Sbjct: 181 DAPKTLYQVDLKGPVALVLGAEGAGMRQLTRKTCDELVSIPMAGAVESLNVSVASGVCLY 240

Query: 239 EAVRQR 244
           EA+RQR
Sbjct: 241 EALRQR 246