Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 267 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Magnetospirillum magneticum AMB-1

 Score =  146 bits (369), Expect = 4e-40
 Identities = 86/240 (35%), Positives = 129/240 (53%), Gaps = 15/240 (6%)

Query: 7   IFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTS---IQVTSRKVLDEK 63
           ++GIHAV A L +   R             RL   +  AK+   +   ++   R  +D  
Sbjct: 37  LYGIHAVCAALANPDRRA-----------RRLVATVEAAKSLPATKVPVETMERSEIDRL 85

Query: 64  -AESTQHQGIVARVKAAKILAEHDLDELLAKTDLPFLLILDGVTDPHNLGACLRNADAAG 122
            A  + HQG+   V+        D+  +        +L+LD VTDPHN+GA LR+A A G
Sbjct: 86  LAPGSVHQGVALLVEPLPATTIEDVIRMADGAPSALVLVLDQVTDPHNVGAILRSAAAFG 145

Query: 123 VQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEADC 182
              ++ P  ++   T  ++K A GA E +PL +VTN+ RT+  L++ G W  G A +A  
Sbjct: 146 ALAVVAPDRHTPDETGTLAKSASGALERMPLVRVTNVVRTLEDLKKAGFWTAGLAADAPK 205

Query: 183 ELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAVR 242
            L +A+L G + + +GAEG+G+RRL+RE CD LV +PM G + SLNVS A  + L+E  R
Sbjct: 206 TLAEANLSGKVVLVLGAEGEGMRRLTREHCDHLVRLPMCGEMESLNVSNAAAVALYEMRR 265