Pairwise Alignments

Query, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 246 a.a., 23S rRNA Gm-2251 2'-O-methyltransferase (EC 2.1.1.185) from Kangiella aquimarina DSM 16071

 Score =  270 bits (691), Expect = 2e-77
 Identities = 141/243 (58%), Positives = 178/243 (73%), Gaps = 4/243 (1%)

Query: 5   DIIFGIHAVEALLKHSPERIIELWLLQGREDERLTPLIRQAKAFGTSIQVTSRKVLDEKA 64
           ++++G+HAVE LLK S ER+  L++   R D+R   +++ A+     +    R  LDE  
Sbjct: 3   ELVYGLHAVEVLLKRSSERVERLYIQSNRHDQRSHKVVKLAQDKNIPVIQKDRDELDEMT 62

Query: 65  ESTQHQGIVA--RVKAAKILAEHDLDELLAKTD-LPFLLILDGVTDPHNLGACLRNADAA 121
           +  +HQG++A  R +  K   E  + ELL + D  P +LILDGVTDPHNLGACLR+ADAA
Sbjct: 63  DQ-RHQGVIAVCRPEKKKSFHEKHIPELLNQIDEAPLILILDGVTDPHNLGACLRSADAA 121

Query: 122 GVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVTNLARTMRHLQEKGVWIVGTAGEAD 181
           GV  +I PKDN+  +T VV KVACGAAETVP   VTNL RTM+ LQE GVWI GTAGEA+
Sbjct: 122 GVHMVIAPKDNAASITDVVRKVACGAAETVPFIPVTNLVRTMKQLQEAGVWIAGTAGEAE 181

Query: 182 CELYQADLKGPLAIAMGAEGKGLRRLSRECCDTLVSIPMSGSVSSLNVSVATGICLFEAV 241
            ++YQA+LKGPLAI MGAEG+G+RRL+RE CD L+ IPM+G VSSLNVSVATG+ LFEAV
Sbjct: 182 QDIYQANLKGPLAIVMGAEGEGMRRLTRENCDYLIKIPMAGEVSSLNVSVATGVTLFEAV 241

Query: 242 RQR 244
           RQR
Sbjct: 242 RQR 244